Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq747 127 3e-24 >seq747 Length=368976 Score = 127 bits (140), Expect = 3e-24 Identities = 217/311 (70%), Gaps = 4/311 (1%) Strand=Plus/Plus Query 186534 GGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGAT 186593 || || ||||| || ||||| |||||||||| |||||| || ||||||||| ||||| Sbjct 84014 GGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTTTATCAAGAT 84073 Query 186594 GG-CGAACAAGCAAAC-ACATTCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATT 186651 | || || | || || || || ||| | | || ||||||||| |||| Sbjct 84074 GCTCGTGCAT--ATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAGAAACTTATT 84131 Query 186652 CGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGC 186711 | ||| | || || || | |||||||| || || || || | || || |||||| Sbjct 84132 CAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTCAAATAAGA 84191 Query 186712 GTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTG 186771 | |||||||||||||||||||| ||||| ||| | ||| | ||| | ||||| |||| Sbjct 84192 GATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATCTTCAATTG 84251 Query 186772 GCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAG 186831 | || ||||| | || |||| | | |||||||| ||| | ||| || ||| || Sbjct 84252 GTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGAATTGAAAG 84311 Query 186832 CAGCAGAGGAT 186842 ||||||| ||| Sbjct 84312 CAGCAGAAGAT 84322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621995067274560