Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq2600 91.5 4e-14 >seq2600 Length=11323 Score = 91.5 bits (100), Expect = 4e-14 Identities = 205/304 (67%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 36480 ACAATCTCTGTGGTGTATCTGTCTATTCCGTTGCTGTCAGTCCATTTACGAGTACGAAGC 36539 || ||||| || ||||| | || | ||| | ||| ||| ||||| || ||| Sbjct 1750 ACGATCTCAGTCGTGTAGCGATCCGTGCCGCTTTGGTCTTGCCACTTACGCGTGGAAAGT 1691 Query 36540 TGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGGTATTCTCCTGCAACTTCCGCAAGT 36599 || |||||||| || | ||||| ||||| | ||||| || || |||| || || | | Sbjct 1690 TGTCCTTCGATATATATTTGCGAGCCTTTGTGCAGGTACTCACCAACAACATCGGCTAAT 1631 Query 36600 TTCCCGAATATGACAATACGATGCCACTCTGTCTGTTCTTTCTTTTCTCCTGTCTGCTTA 36659 || || || | |||| |||||||||||||| | |||| | || || |||||||| Sbjct 1630 TTTCCAAAGAAAACAACGCGATGCCACTCTGTTTTTTCTCGTTGCTCACCCGTCTGCTTG 1571 Query 36660 TCTTTCCACTGCTCAGATGTTGCAACGGAAATGTTGACAATTGCAGAACC-TGATGCTGA 36718 || ||| ||||||||||| | ||||| ||| | | |||| || || || Sbjct 1570 TCACGCCAGGTTTCAGATGTTGCGATTGAAATATTGGC---TACAGAGCCACCATTTTGC 1514 Query 36719 ATATTTA---ACTTCAGGGTCGTTTCCGAGAGTTCCGACAATAATTACTTTATTTACGCC 36775 || | | | ||| || || | |||||| | |||||||| || ||||| || || || Sbjct 1513 AT-TGCACGGAGTTCGGGATCTTGGCCGAGATTCCCGACAATGATGACTTTGTTAACACC 1455 Query 36776 GCGT 36779 ||| Sbjct 1454 ACGT 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152065703588256