Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq12789 91.5 1e-13 >seq12789 Length=2278 Score = 91.5 bits (100), Expect = 1e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTGGCT 22808 ||||| || ||||| || ||| || | || || || || || ||| |||| |||||||| Sbjct 914 GCCTTCGCAGCTGTGGAGGGCATCTTCTTCTCCGGCTCTTTCTGCT-CCATCTTCTGGCT 856 Query 22809 GAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGA 22868 ||||||||| |||||||| || || | || |||||||||||||| |||||| || Sbjct 855 CAAGAAACGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGTTGATCTCCCGTGATGA 796 Query 22869 AGGTCTACACTGTGACTTTGCTTG 22892 ||| | ||| ||||| ||||| Sbjct 795 GGGTATGCACACCGACTTCGCTTG 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356124109265257