Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq7630 95.1 1e-14 >seq7630 Length=872 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || || |||||||| | || || ||||| || | ||| || || Sbjct 270 CCACCTCTGAGTCTCAGGACCAAGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAA 329 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | || || ||||| || || | ||||| | |||||| ||||| || ||| Sbjct 330 AGAGTTCTTCCGTCTTCAAGCTGCTTGCCTGCGAAGATAAGTCTTTGTTGATCGGGGGGA 389 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | || || ||||| ||| ||| || || | | | || || Sbjct 390 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCTGAGGGCTCAACA 449 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| |||||||| || || || || || || || ||||| ||||| Sbjct 450 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448149881802840