Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq24703 91.5 2e-13 >seq24703 Length=2611 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGGAGG-CTTTCACC-TCGCTAGTTTTCAAGACTA 31348 ||||| |||| ||||||||| |||| ||| || ||||| ||||||||||||||||||| Sbjct 1570 GCGGAAGCGGTGAGATTCGAACTCACGAAGGGCTCTCACCCTCGCTAGTTTTCAAGACTA 1511 Query 31349 GAGCCTTCAACCACTCGACCAC 31370 | ||||||||||||||| |||| Sbjct 1510 GTGCCTTCAACCACTCGGCCAC 1489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621928682933360