Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq24216 91.5 3e-14 >seq24216 Length=1664 Score = 91.5 bits (100), Expect = 3e-14 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 25066 TGGCGAAAGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGTCTTGAAA 25125 ||||||||||||| ||||||| | || || || || ||||| ||||| | ||| Sbjct 985 TGGCGAAAGAATTGGGTTGTCCAGTAATTGCTTTGTCGCAGCTAAACCGTTCATTGGAAC 1044 Query 25126 ACAGACAGGATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATAGAACAGG 25185 | | | ||||||| || ||| ||||| |||||||| || || ||||| || || | Sbjct 1045 AACGCCCCAATAAGCGTCCTGTTATGTCAGATTTGCGCGAATCAGGAGCGATTGAGCAAG 1104 Query 25186 ATGCTGATCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCCGACAGCTCTGACA 25245 |||| || | || || || || || || | || |||||||| || | || | Sbjct 1105 ATGCGGACGTTATTTTGTTTATTTATCGCGATCAGGTTTATAACCCTGATTCGCCAGATA 1164 Query 25246 AAGGCATTGCCGAGATTATCATTGGCAAACACAGGAATGG 25285 |||||| || |||||||| || || ||||| | ||||| Sbjct 1165 AAGGCACCGCTGAGATTATTATCGGTAAACAACGCAATGG 1204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101499194359584