Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq21373 109 8e-19 >seq21373 Length=1727 Score = 109 bits (120), Expect = 8e-19 Identities = 223/329 (68%), Gaps = 2/329 (1%) Strand=Plus/Minus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGTGTT 139498 ||||| || || || || || || || || || ||| | |||| |||| | ||| Sbjct 1612 AAAGGCATCATATTGGCTGGCGGCTCAGGTACTCGCCTTTATCCTGTGACGAAATCTGTA 1553 Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTT 139558 || || ||||||||||| | |||||||||||||||||||| || ||| | || | | Sbjct 1552 TCCAAGCAGTTATTACCGATCTACGATAAACCAATGATTTATTACCCACTAACGTCATTG 1493 Query 139559 ATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATAGA-AATTCTTT 139617 || || || ||| || || || || || || || ||||| |||| | | |||| Sbjct 1492 ATGTTGGCGGGCATACGAGACATTCTCATTATCTCCACGCCACAAGATACACCACGCTTT 1433 Query 139618 CGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTTCAAGA 139677 | ||| ||| || ||| | || |||| | ||| ||| | ||||| |||| Sbjct 1432 CAAGAGCTT-CTTGGTGATGGCGCACAGTGGGGTATTAATCTTAGCTACGCGATTCAGCC 1374 Query 139678 AAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATCTAA 139737 || |||| || |||||||||||| |||||||| ||||||| | || || || Sbjct 1373 TTCGCCAGATGGCTTGGCACAAGCTTTCATTATCGGTAAAGAATTTGTCGGCAATTCACC 1314 Query 139738 AGTAGCTCTGATTTTAGGTGACAACATTT 139766 | ||| | ||| |||||||||| |||| Sbjct 1313 ATCTGCTTTAATTCTAGGTGACAATATTT 1285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701641146651680