Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq24649 105 1e-17 >seq24649 Length=1633 Score = 105 bits (116), Expect = 1e-17 Identities = 130/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 38382 CAACGCTCAGCAGATACATT-CTTGGGAGTTCCACTGAATATCACATCATATTCAGTACT 38440 |||||| ||||||| || |||||| |||||| | |||||| |||| ||| | || | Sbjct 1240 CAACGCAGTGCAGATATTTTTCTTGGG-GTTCCATTCAATATCGCATCCTATGCTTTATT 1182 Query 38441 CACTCATATGATAGCACAAATTACTGGATTAGAAGTTGGTGAATTTATCTGGAACGGTGG 38500 || |||||| | |||||| |||| | ||||||| || ||||| |||| ||||| Sbjct 1181 GACACATATGGTTGCACAACAAACTGATCTGCAAGTTGGGGACTTTATTTGGACTGGTGG 1122 Query 38501 AGATTGTCATATTTACTTGAATCATATCGAACAAGTAAAAGAACAATTATCACGA 38555 || |||||| | ||| ||||| || |||||||| | ||||||||||| ||| Sbjct 1121 CGACTGTCATTTATACAGCAATCACATGGAACAAGTCGACGAACAATTATCGCGA 1067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106100083149128