Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq24649 86.0 9e-12 >seq24649 Length=1633 Score = 86.0 bits (94), Expect = 9e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 98994 ATGCGTTTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGC 99053 ||||| ||| ||||| |||| |||||| |||| || || || || ||||| Sbjct 1633 ATGCGATTCGACTTGAGCCAAGGCTTCCCGTTGGTGACCACAAAAAAACTACATTTGCGC 1574 Query 99054 TCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAA 99113 |||||||| |||||||| | ||||| | || ||||||||| || | ||| Sbjct 1573 TCTATTATTCATGAACTTATCTGGTTTTTAGCTGGATCAACCAATATCGCTTATTTAAAA 1514 Query 99114 GATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTA 99173 || ||||| ||| | |||||||| || ||||| || ||||||| || | ||||| || Sbjct 1513 GAAAATGGCGTATCGATTTGGGATGATTGGGCTGATGAAAATGGTGATTTAGGTCCAGTC 1454 Query 99174 TACGGTAAGCAGTGGCG 99190 || || |||||||| Sbjct 1453 TATGGGTCTCAGTGGCG 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716410889206760