Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq24649 113 2e-20 >seq24649 Length=1633 Score = 113 bits (124), Expect = 2e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 37926 TGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGT 37985 |||| || || ||| |||| |||||||| | ||| | |||| || || || ||| Sbjct 1305 TGCCCCCCTGCCATGCATTTTTCCAGTTTTATGTTGCCGATGGCAAGCTGTCATGCCAGC 1246 Query 37986 TATATCAACGTAGTGCTGAT-TTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCG 38044 |||||||||| ||||| ||| || ||||| || |||||||| ||||| ||| |||||| Sbjct 1245 TATATCAACGCAGTGCAGATATTTTTCTTGGG-GTTCCATTCAATATCGCATCCTATGCT 1187 Query 38045 TTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGACT 38104 || | |||||||| || || | || || | ||||||| || ||| | |||||| Sbjct 1186 TTATTGACACATATGGTTGCACAACAAACTGATCTGCAAGTTGGGGACTTTATTTGGACT 1127 Query 38105 GGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAAAAACAATTA 38158 ||||| | ||| | ||||| |||||| | || |||| | |||||||| Sbjct 1126 GGTGGCGACTGTCATTTATACAGCAATCACATGGAACAAGTCGACGAACAATTA 1073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248733126736627