Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7629 93.3 3e-14 >seq7629 Length=3052 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | | | |||||| || || ||| ||| ||||| ||||||||||| || Sbjct 2722 CCACCTCTGAGTCTGAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGAC 2781 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || | |||| ||||| | ||||| ||||| || | | ||| ||||| | || Sbjct 2782 AAGGTTCTACCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGTTGATCAGGAGGG 2841 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| ||| || ||| || | || | ||||||| | ||||| Sbjct 2842 ATACCTTCCTTGTCCTGAATCTTGGCCTTC-ACGTTTTCGATGGTGTCGGAAGGCTCCAC 2900 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || ||||| || || || || || ||||||| ||| Sbjct 2901 ATCAAGGGTGATAGTCTTACCAGTCAAAGTCTTGACGAAGATCTACAT 2948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328602970668480