Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetmemena_20sp._20SeJ-2015_20[genbank_20GCA_5F001273295.2_202015-12- 23] 25,219 sequences; 60,638,083 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq24649 118 7e-22 >seq24649 Length=1633 Score = 118 bits (130), Expect = 7e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 70376 CTTCCACCATGTCATACACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAG 70435 || || || || ||| || | ||||| || | ||| | ||||| ||||| || |||||| Sbjct 1306 CTGCCCCCCTGCCATGCATTTTTCCAGTTTTATGTTGCCGATGGCAAGCTGTCATGCCAG 1247 Query 70436 CTATATCAACGTAGTGCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCC 70495 ||||||||||| ||||| || ||||| ||||| || ||||||||||| ||||| ||||| Sbjct 1246 CTATATCAACGCAGTGCAGATATTTTTCTTGGGGTTCCATTCAATATCGCATCCTATGCT 1187 Query 70496 TTACTTACACATCTTATTGCTGCTGAGTGTGGGTTAGGTGTTGGTGAGTTTGTTTGGACT 70555 ||| | |||||| | |||| | || | ||||| || ||| |||||||| Sbjct 1186 TTATTGACACATATGGTTGCACAACAAACTGATCTGCAAGTTGGGGACTTTATTTGGACT 1127 Query 70556 GGTGGTGA 70563 ||||| || Sbjct 1126 GGTGGCGA 1119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335471259005953