Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq28 89.7 5e-13 >seq28 Length=897071 Score = 89.7 bits (98), Expect = 5e-13 Identities = 205/306 (67%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || || || | ||| ||| |||| ||||| || || |||||||| || | Sbjct 62467 ATATAGGTGTCAATCAAAAGGGAGTAAGTTTCAGAGTGGATATTTTCCATGGCAATTTAG 62408 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC-CACGTAGAATCGTTCCGCTAG 17352 || || || ||| || ||||| | ||||| ||||| ||| | |||| || || || Sbjct 62407 AAACCATAGAAGGCACGAGCTTCGGGGATTTGGACTTCACACAT-GAATTACTCGGCGAG 62349 Query 17353 ATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA 17412 ||||| ||||| || || || ||||| || || | | || |||||||| | Sbjct 62348 GTTTTCAAGGACGATACCATCAGAAGCAGCGAAGAAAGCAAGGACATATTTAATGAAGTG 62289 Query 17413 TTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTC 17472 ||||| |||||| ||| ||||||||||||| ||| ||| | ||| || Sbjct 62288 ACGTTCGTTGTCAGTAAGACGTTCCCAATCCTTTAAATCTTGATATAAATCAATTTCGTC 62229 Query 17473 GGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTAT 17532 | ||||| ||| ||| | | | || || ||||| | ||| | | ||||||| || Sbjct 62228 AGCAGTCCAGAAAGAAGCGAGTTCTTTCTTGTACATTTCCCAGACCTTGTTGTATTTAAT 62169 Query 17533 GGGGAA 17538 |||||| Sbjct 62168 GGGGAA 62163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543497471000