Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq9 181 8e-41 >seq9 Length=1304334 Score = 181 bits (200), Expect = 8e-41 Identities = 350/511 (68%), Gaps = 4/511 (1%) Strand=Plus/Plus Query 101708 TGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTA-GTGACATGAGCAAT 101766 |||||||| |||| | ||||| || ||||| | | |||| || | ||| ||||| Sbjct 105949 TGAGCATCACCTAAAACATGGACGAATTCTCCTA-CTTTCAATTATGTTATATGTGCAAT 106007 Query 101767 CATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGC 101826 ||| ||||| | || ||| |||||||| |||||||| | |||||| ||||||||| Sbjct 106008 CATATGAGTTAGCAAAGCATAACTAGCAATATTAAATGGAATTCCTAATCCCATATCACA 106067 Query 101827 TGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATAC 101886 |||||||| ||||| ||| | || |||||| |||||||||| ||| | ||| Sbjct 106068 TGATCTTTAATACATCATGCAGCTTAATTTACCATCATTTACATAAAATTAACTCATTAC 106127 Query 101887 ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACAT 101946 || || || || | |||| |||| ||| |||||||| |||| ||| | ||| Sbjct 106128 GTGGCAGGGAGGTAGTGCCATCAATGGAAGATCTTTCACATTCCATGCACTCATAATCAT 106187 Query 101947 CCTTCTATCTGTAGGGTTTGTT-TTTATAGTATCAATCAACTGTTTTAATTGGTCAACTC 102005 |||||| || | || || || ||||| || | ||| || | | || | ||| |||| Sbjct 106188 TCTTCTA-CTATCTGGATTTTTCTTTATGGTGTTAATTAAATCCTATAGCTAGTCTACTC 106246 Query 102006 CTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAA 102065 ||| ||||| ||||| | | ||||||||||||| || ||||| ||||| | | Sbjct 106247 CTTATCCTTAATAATTAGTATGCATATCTTTATATTCTGCACCAAAATGTCTCCATTAGA 106306 Query 102066 ATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAA 102125 | ||||| || || || | ||| ||||| | ||| | | |||||| || |||||||| Sbjct 106307 AGCCATAAACTGGACCTAAATCGCCTTCTTATCTATTCTTAAAACCTAGAGAATCTAAAA 106366 Query 102126 ATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGT 102185 || | || || | |||||||| | || || | | | || || |||| Sbjct 106367 ATTCACGGCTACCGTTTCCTTCCCAAATTTTAACACCTTTTTCAGTAAGAATATTACTGT 106426 Query 102186 CAGTAGATCCTCTGATAAACCACAACAGTTC 102216 |||| |||| |||||||||| | || ||| Sbjct 106427 TAGTACTTCCTTTGATAAACCATATCAATTC 106457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249769106575