Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq9 165 7e-36 >seq9 Length=1304334 Score = 165 bits (182), Expect = 7e-36 Identities = 288/419 (69%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| || ||||| ||||| || ||||| || |||||||||||||||| || |||||| Sbjct 106336 AAGAAGGCGATTTAGGTCCAGTTTATGGCTTCTAATGGAGACATTTTGGTGCAGAATATA 106277 Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || ||| | || ||||||| ||| |||||||||| | || | || | ||||| Sbjct 106276 AAGATATGCATACTAATTATTAAGGATAAGGAGTAGACTAGCTATAGGATTTAATTAACA 106217 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 || || | || ||| | |||||||| ||| | | || ||||| | |||||| Sbjct 106216 CCATAAAGAAAAATCCAGATAGTAGAAGAATGATTATGAGTGCATGGAATGTGAAAGATC 106157 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 | || || ||||| | ||||| || || | | | ||||||| || | || | Sbjct 106156 TTCCATTGATGGCACTACCTCCCTGCCACGTAATGAGTTAATTTTATGTAAATGATGGTA 106097 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 |||| || |||||| || |||| |||||||||| | || |||| || |||| Sbjct 106096 AATTAAGCTGCATGATGTATTAAAGATCATGTGATATGGGATTAGGAATTCCATTTAATA 106037 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 |||| |||||||| |||| || |||||||||||||| | ||| | || ||| || | Sbjct 106036 TTGCTAGTTATGCTTTGCTAACTCATATGATTGCACATATAACATAATTGAAAGTAGGAG 105977 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631 | || ||||| |||| || || ||| ||||| || ||| | ||| |||||| Sbjct 105976 AATTCGTCCATGTTTTAGGTGATGCTCATGTTTACTCAAACCATGTTGAATAATTAAAA 105918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182418857125