Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq77 86.0 6e-12 >seq77 Length=437778 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | || |||||||||| ||||| ||||||||||| || || ||| Sbjct 1695 CCACCTCTTAATCTTAATACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCGGAA 1754 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||||| |||||||||||| | || || | || | ||| ||||| Sbjct 1755 AGAGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAAATAAGTCTTTATTAATCAGGAGGA 1814 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || || || || | | ||| | | ||| | || || || Sbjct 1815 ATACCTTCCTTATCTTAAATCTTAGCCTTGACATTTTCAATAGAGTCAGAGGCTTCAACA 1874 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || ||||| || || ||||| |||| ||| Sbjct 1875 TCGAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTACAT 1921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061984740000