Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq9 131 2e-25 >seq9 Length=1304334 Score = 131 bits (144), Expect = 2e-25 Identities = 289/422 (68%), Gaps = 20/422 (5%) Strand=Plus/Plus Query 6841 TAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAGCT-TG 6899 |||| ||||||||| |||| ||| | ||||| ||| ||||| || | | || Sbjct 105943 TAAACATGAGCATCACCTAAAACATGGACGAATTCTCCTACTTTCA-ATTATGTTATATG 106001 Query 6900 AGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCAT 6959 ||||| | || |||| || |||||| ||| | |||||| || | ||||||||||| Sbjct 106002 TGCAATCATATGAGTTAGCAAAGCATAACTAGCAATATTAAATGGAATTCCTAATCCCAT 106061 Query 6960 ATCTGCTGATCTTTGATAACAT--TGACAAGATAAAATATTGTCTATAGCATAAAATTGA 7017 ||| |||||||| ||| ||| || || ||| || || | ||||||||| | Sbjct 106062 ATCACATGATCTTTAATA-CATCATG-CAGCTTAATTTACCATCATTTACATAAAATTAA 106119 Query 7018 CACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGG-----ATTCCAAG 7072 | || ||| || || ||||||| ||| ||| || |||| |||||| | Sbjct 106120 CTCATTACGTGGCAGGGAGGTAGT---GCC--ATCAATGGAAGATCTTTCACATTCCATG 106174 Query 7073 CAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATT--TG 7130 || |||| | || | |||| || ||||||| | |||| | ||||| | | | | | Sbjct 106175 CACTCATAATCATTCTTCTACTATCTGGATTTTTCTTTA-TGGTGTTA-ATTAAATCCTA 106232 Query 7131 TAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAA 7190 || | |||| || | |||| |||||||||||| || | |||| | || ||||| Sbjct 106233 TAGCTAGTCTACTCCTTATCCTTAATAATTAGTATGCATATCTTTATATTCTGCACCAAA 106292 Query 7191 ATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCC 7250 ||||||||||| || ||||||| ||||||||||| ||||||| | || ||||| || Sbjct 106293 ATGTCTCCATTAGAAGCCATAAACTGGACCTAAATCGCCTTCTTATCTATTCTTAAAACC 106352 Query 7251 TA 7252 || Sbjct 106353 TA 106354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595869579270000