Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq77 113 4e-20 seq105 86.0 6e-12 >seq77 Length=437778 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | ||||| |||||||| ||||| ||| | ||||| | || | ||| | Sbjct 1465 ATGTAAATCTTTGTTAAAACATTGACTGGTAAAACAATCACTCTAGATGTTGAAGCCTCT 1406 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | || || | ||||| |||||| || || ||||| || ||||| ||| || Sbjct 1405 GACTCTATTGAAAACGTCAAGGCTAAGATTTAAGATAAGGAAGGTATTCCTCCTGATTAA 1346 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||||||| || || ||| |||| ||||||| |||| | ||||| || Sbjct 1345 TAAAGACTCATTTTCGCTGGTAAATAACTTGAAGATGGAAGAACTCTTTCTGACTACAAT 1286 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||||||| | || | || ||||| | |||||||| Sbjct 1285 ATTCAAAAGGAATCTACTCTTCACTTAGTATTGAGATTAAGAGGAGG 1239 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | || || || || || ||||| || | ||||| |||| | ||| | Sbjct 1921 ATGTAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTCGATGTTGAAGCCTCT 1862 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | || || | ||||| |||||| || || ||||| || ||||| ||| || Sbjct 1861 GACTCTATTGAAAATGTCAAGGCTAAGATTTAAGATAAGGAAGGTATTCCTCCTGATTAA 1802 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||| |||| | || |||||||||||||||| |||| | |||||| || Sbjct 1801 TAAAGACTTATTTTTGCTGGTAAACAACTCGAAGATGGAAGAACTCTTTCCGACTACAAT 1742 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||||||| | || | || | ||| | ||||| || Sbjct 1741 ATTCAAAAAGAATCTACTCTTCACTTAGTATTAAGATTAAGAGGTGG 1695 >seq105 Length=326417 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | ||||| ||||||||||||||||| | || || | || | | || Sbjct 8480 ATGTAAATATTTGTTAAAACATTAACTGGAAAGACTATTACTCTAGATGTCTAGTCTTCA 8421 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | || || | | ||| ||||| || || ||||| || ||||| ||| || Sbjct 8420 GACTCTATAGAAAATATTAAAACTAAGATATAAGATAAGGAAGGTATCCCTCCTGATTAA 8361 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||| |||| | || || ||||||| |||| |||| || ||||||||| Sbjct 8360 TAAAGACTTATTTTTGCTGGTAAGTAACTCGATGATGGAAGAACTATCTCTGACTATAAC 8301 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| |||||||| || ||||| | || || ||| | ||||| || Sbjct 8300 ATTTCTAAAGAATCAACACTCCATTTAGTTCTTAGATTGAGAGGTGG 8254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660455434000