Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 136 1e-26 >seq9 Length=1304334 Score = 136 bits (150), Expect = 1e-26 Identities = 345/522 (66%), Gaps = 2/522 (0%) Strand=Plus/Minus Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGG 111431 |||||||| |||||||| || ||| ||| | | |||| ||| ||||||||| Sbjct 106448 TGGTTTATCAAAGGAAGTACTAACAGTAATATTCTTACTGAAAAAGGTGTTAAAATTTGG 106389 Query 111432 GATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGT 111491 || ||||| || ||||| ||| ||||||| | ||| || | | ||||||| Sbjct 106388 GAAGGAAACGGTAGCCGTGAATTTTTAGATTCTCTAGGTTTTAAGAATAGATAAGAAGGC 106329 Query 111492 GATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG 111551 ||| | || |||||||| || || ||||| | || ||||||||||| || ||| ||| Sbjct 106328 GATTTAGGTCCAGTTTATGGCTTCTAATGGAGACATTTTGGTGCAGAATATAAAGATATG 106269 Query 111552 CACGACTCA-TATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAA 111610 || ||| | ||| | | | ||| || | || || || | ||| | || || Sbjct 106268 CA-TACTAATTATTAAGGATAAGGAGTAGACTAGCTATAGGATTTAATTAACACCATAAA 106210 Query 111611 GAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAA 111670 ||| || ||| | | | | || ||||||||||||||||| || | | | Sbjct 106209 GAAAAATCCAGATAGTAGAAGAATGATTATGAGTGCATGGAATGTGAAAGATCTTCCATT 106150 Query 111671 AATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTC 111730 |||||||| || || || || | ||| | | ||||||||| | || || | | Sbjct 106149 GATGGCACTACCTCCCTGCCACGTAATGAGTTAATTTTATGTAAATGATGGTAAATTAAG 106090 Query 111731 ATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAG 111790 ||| |||||| | |||| |||||| || | || |||| ||||||||||| || Sbjct 106089 CTGCATGATGTATTAAAGATCATGTGATATGGGATTAGGAATTCCATTTAATATTGCTAG 106030 Query 111791 TTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCAT 111850 ||| || | || ||| | || || ||| | ||| | | ||| || |||||| | Sbjct 106029 TTATGCTTTGCTAACTCATATGATTGCACATATAACATAATTGAAAGTAGGAGAATTCGT 105970 Query 111851 TCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGA 111892 || ||| | || ||||| ||||||||| ||||||| |||| Sbjct 105969 CCATGTTTTAGGTGATGCTCATGTTTACTCAAACCATGTTGA 105928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348172754150