Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq77 86.0 5e-12 >seq77 Length=437778 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||| ||||||| || || || |||| || || ||||| || | || ||| || Sbjct 1921 ATGTAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTCGATGTTGAAGCCTCT 1862 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || ||| ||| | || || || ||| || || ||||| |||| ||| || Sbjct 1861 GACTCTATTGAAAATGTCAAGGCTAAGATTTAAGATAAGGAAGGTATTCCTCCTGATTAA 1802 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 |||| ||||||| ||| || |||||| | |||||| | |||| | |||| || ||| Sbjct 1801 TAAAGACTTATTTTTGCTGGTAAACAACTCGAAGATGGAAGAACTCTTTCCGACTACAAT 1742 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || |||||||||||||| || || ||||| || Sbjct 1741 ATTCAAAAAGAATCTACTCTTCACTTAGTATT 1710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423038324365000