Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq9 93.3 4e-14 >seq9 Length=1304334 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 20248 ATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACC 20307 ||| |||| ||||| ||||| | | ||| || ||||| ||||| |||| ||| || || Sbjct 105999 ATGTGCAATCATATGAGTTAGCAAAGCATAACTAGCAATATTAAATGGAATTCCTAATCC 106058 Query 20308 CATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTG 20367 ||| || | || || | ||||| | ||| | | ||| ||| ||||||||||| Sbjct 106059 CATATCACATGATCTTTAATACATCATGCAGCTTAATTTACCATCATTTACATAAAATTA 106118 Query 20368 ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACA 20427 || | | ||| ||||| || || |||||||| | | || | ||||| |||| Sbjct 106119 ACTCATTACGTGGCAGGGAGGTAGTGCCATCAATGGAAGATCTTTCACATTCCATGCACT 106178 Query 20428 CATAATGATTCTTCTATCGTGCGGATTATTTTTTAT 20463 |||||| ||||||||| | ||||| || ||||| Sbjct 106179 CATAATCATTCTTCTACTATCTGGATTTTTCTTTAT 106214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441371006923000