Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq105 95.1 3e-14 >seq105 Length=326417 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||| |||||||||||| | || || | ||| ||||| | ||| |||||||| || Sbjct 7602 TTCTTTTTAGATATTATAGTCAGAGATAGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAA 7661 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | | || | | ||||| ||||| ||||| || |||| | ||| || || Sbjct 7662 TATAAGTCTTTATTAATCAGGAGGGATACCTTCCTTATCTTGAATTTAAGTTTTAACATT 7721 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| || | | || || ||||| ||||| || || ||||| || || Sbjct 7722 TTCAATGGTATCAGCGGAATTAATATCAAGAGTGATAGTCTTTCCTGTAAGAGTTTTTAC 7781 Query 288462 GAATATCTGCAT 288473 || |||| ||| Sbjct 7782 AAAAATCTACAT 7793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649487845350