Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=2195051 Score = 87.8 bits (96), Expect = 2e-12 Identities = 205/309 (66%), Gaps = 14/309 (5%) Strand=Plus/Plus Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 ||||| ||||| | || || || || || ||||||||||| |||||||| | | || Sbjct 428536 GGTACAAATGGTATTTCTAATGGACTTGTTCCTATGCTCCGTGTCTTCAATGATACTGCT 428595 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 | || || || || |||||||| | ||| |||||||| || || || || | || || Sbjct 428596 AGATATGTTGATCAAGGTGGTGGCAAGAGAAAGGGTTCCTTTGCCGTTTACTTAGAACCT 428655 Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 ||||| | || || | ||| | | || ||||| ||||| || || | Sbjct 428656 TGGCATTCTGATGTTTTCGACTTCCTTTAGTTGAAGAAGAATCACGGTAAGGAAGAATAA 428715 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC--- 94317 || || ||||| | |||| || || ||| | || || ||||| ||||| | ||| Sbjct 428716 AGAGCTAGAGATTTATTCTTTGCACTTTGGATTCCCGATCTTTTCATGAAGAGAGTCATT 428775 Query 94318 ---GA-GAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || | |||| |||| |||| | ||||| |||||||| || ||||| | || Sbjct 428776 GCTGATGGAAAA-------TGGACTCTTATGTGTCCTAATGAATGCCCTGGACTTCCTGA 428828 Query 94374 CGTTTGTGG 94382 ||||| || Sbjct 428829 TGTTTGGGG 428837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721190187000