Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 122 1e-22 >seq2 Length=2195051 Score = 122 bits (134), Expect = 1e-22 Identities = 178/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 116335 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 116394 || ||| |||| ||||| || || | ||| | ||||||| |||||||| ||||||| Sbjct 429249 ATTACCTTATTAAGATTGAATGTAACTATCTTAGCAATTTCATAAAGCTTTTGGTAATCA 429190 Query 116395 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454 | | | | ||| || ||| | ||| ||| | ||| || || | ||| || || Sbjct 429189 TATTCTCTATT---TTCCTTAACAAATTTAACAAGAGAGATAGAAGCTAAATTGCAAACT 429133 Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514 | |||||| ||||||| || | |||||| || || | || ||||| ||||| Sbjct 429132 GCAACCTCATCAGGGGCAGTGTATTCAACAATTTCAGTGCAGAGGTTAGAACTTTTAATT 429073 Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574 || || | ||| | ||||||||||||| |||| || ||||||||||||||||| || || Sbjct 429072 GTACCTAGGTTTTATTGATTTGACTTTCTGTTGCAAGCATCCTTGTAGAGCATGTAGGGA 429013 Query 116575 GTCCCCGTCTC 116585 || ||||| || Sbjct 429012 GTGCCCGTTTC 429002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504707627000