Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq81 84.2 2e-11 >seq81 Length=427612 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301 ||||| |||| ||||| || || | || || || ||||| ||| | ||||| || ||| Sbjct 245411 AAATGTAAATTTTCGTTAAGACTTTAACTGGTAAGACCATTACCTTAGACGTTGAAGCCT 245352 Query 38302 CCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 | |||| | ||| | || | || |||| || || || || || ||| |||| Sbjct 245351 CTGACACTATTGAAAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATCCCCCCCGATT 245292 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 || | | || || | ||| || || || || || |||| | ||||| ||| |||| Sbjct 245291 AATAAAGACTTATCTTCGCTGGTAAGCAACTTGAAGACGGCAGAACCCTTTCCGATTACA 245232 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||| | || || || || || || | || ||||| || Sbjct 245231 ACATCCAAAAGGAATCTACCCTTCACTTAGTCTTGAGATTAAGAGGTGG 245183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170768048000