Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq64 89.7 6e-13 >seq64 Length=536337 Score = 89.7 bits (98), Expect = 6e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG 159609 |||||||| ||||| ||||| |||| | | ||| || |||| | || | | Sbjct 299800 ATGATTACCTATCCTTCTACCAGTGGTATTTACGAAGAAAGTATCAAGGAAATGATTGAT 299859 Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669 || | ||| | ||||||| || || || | |||||||| ||| | ||||| || Sbjct 299860 GTTATCCATCACTATGGTGGACAAGTCTACATGGATGGTGCTAATATGAATGCTCAAAGT 299919 Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729 ||| | | || || || ||||| ||||| ||||| |||| ||||||||||| Sbjct 299920 GGTTTCACTTCTCCTGGTTTCTTAGGTGCTGATGTTTGTCACTTAAATTTACATAAGACT 299979 Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGG 159761 |||| |||||| ||||| ||||| |||||||| Sbjct 299980 TTCTCTATTCCTCATGGTGGTGGTGGTCCTGG 300011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048811042000