Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 159 2e-34 >seq2 Length=2195051 Score = 159 bits (176), Expect = 2e-34 Identities = 294/431 (68%), Gaps = 0/431 (0%) Strand=Plus/Minus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 ||| ||| ||| || | ||| |||||||| | |||| | ||||||||||| ||||| | Sbjct 428771 ACTCTCTTCATGAAAAGATCGGGAATCCAAAGTGCAAAGAATAAATCTCTAGCTCTTTAT 428712 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044 ||||| || ||||||||||| || | | | ||| || |||| ||| || ||||| ||| Sbjct 428711 TCTTCCTTACCGTGATTCTTCTTCAACTAAAGGAAGTCGAAAACATCAGAATGCCAAGGT 428652 Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104 ||||| || | ||||| ||| ||||| || || ||||||||||| || ||||| ||| Sbjct 428651 TCTAAGTAAACGGCAAAGGAACCCTTTCTCTTGCCACCACCTTGATCAACATATCTAGCA 428592 Query 26105 GTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA 26164 || |||||||| || | ||| ||||| | |||| | |||| || ||||| | | Sbjct 428591 GTATCATTGAAGACACGGAGCATAGGAACAAGTCCATTAGAAATACCATTTGTACCTCTA 428532 Query 26165 ATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTT 26224 || | || | | ||| |||| ||| | || ||| || ||||| || | || Sbjct 428531 ATATAACTATCTCTAGCTCTGATATTATGAACGGAAAGACCAATACCACCTGCACTCTTA 428472 Query 26225 GAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATT 26284 || || ||||| | || || || |||| || | |||| ||| ||| |||| Sbjct 428471 GAGATTAAAGCACATTGCTTAAGAGTGTCATAAATACCGTCTATGGAATCTGCTTACATT 428412 Query 26285 CCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGT 26344 | ||| |||||| | | || | | | || |||||||| || | || || Sbjct 428411 TGAAGTAAGAAACAACTACTCATTTAGGGCTTGGGAGTACCTGAATTGAAAAGAGTAGGA 428352 Query 26345 GTAGCATGAGT 26355 ||||||||||| Sbjct 428351 GTAGCATGAGT 428341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038997724375