Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq64 93.3 5e-14 >seq64 Length=536337 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 138201 CCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACA 138260 |||||||| ||||| ||||| |||||| |||| |||||||||||||||| ||||| ||| Sbjct 300011 CCAGGACCACCACCACCATGAGGAATAGAGAAAGTCTTATGTAAATTTAAGTGACAAACA 299952 Query 138261 TCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCG 138320 || ||||| || || || | | ||| || ||||| | ||| |||||||| Sbjct 299951 TCAGCACCTAAGAAACCAGGAGAAGTGAAACCACTTTGAGCATTCATATTAGCACCATCC 299892 Query 138321 AGATATACCTGACCACCATTGTCATG 138346 | || || || ||||||| || ||| Sbjct 299891 ATGTAGACTTGTCCACCATAGTGATG 299866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996047819000