Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq9 105 8e-18 >seq9 Length=1304334 Score = 105 bits (116), Expect = 8e-18 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 172448 TGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGG 172507 ||| | |||||||||| ||||| | | || ||| |||||||||||||||| || Sbjct 106410 TGAAAAAGGTGTTAAAATTTGGGAAGGAAACGGTAGCCGTGAATTTTTAGATTCTCTAGG 106351 Query 172508 GTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGC 172567 |||| | ||| ||||||| |||||||| ||| ||||||| || ||||||||||| Sbjct 106350 TTTTAAGAATAGATAAGAAGGCGATTTAGGTCCAGTTTATGGCTTCTAATGGAGACATTT 106291 Query 172568 AGGGGCTCAATATATCGACTGTG-ATACAGATTACACAGGACAAGGAGTGGACCAATTAA 172626 || || |||||| || | || |||| |||| |||| ||||||| ||| | || Sbjct 106290 TGGTGCAGAATATAAAGA-TATGCATACTAATTATTAAGGATAAGGAGTAGACTAGCTAT 106232 Query 172627 GTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATG 172673 | ||||| || || | || || ||||| |||||||| ||| Sbjct 106231 AGGATTTAATTAACACCATAAAGAAAAATCCAGATAGTAGAAGAATG 106185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632487030511000