Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq77 114 1e-20 >seq77 Length=437778 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || | |||||| || || | ||||| || ||||||||||||||||| Sbjct 1239 CCTCCTCTTAATCTCAATACTAAGTGAAGAGTAGATTCCTTTTGAATATTGTAGTCAGAA 1298 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||| || | |||||| ||| ||||||| | | || ||| || || Sbjct 1299 AGAGTTCTTCCATCTTCAAGTTATTTACCAGCGAAAATGAGTCTTTATTAATCAGGAGGA 1358 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || ||||| ||||| || | | |||| | || ||| | ||||||||| Sbjct 1359 ATACCTTCCTTATCTTAAATCTTAGCCTTGACGTTTTCAATAGAGTCAGAGGCTTCAACA 1418 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| || | ||| || |||| ||||| |||||||||| |||| Sbjct 1419 TCTAGAGTGATTGTTTTACCAGTCAATGTTTTAACAAAGATTTACATA 1466 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||| || || | ||||| ||||||||||||||||||||| | | | | ||| Sbjct 1710 AATACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCGGAAAGAGTTCTTCCATCT 1769 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 ||||| |||||||| || |||| || | | || ||| || || | ||| || ||||| Sbjct 1770 TCGAGTTGTTTACCAGCAAAAATAAGTCTTTATTAATCAGGAGGAATACCTTCCTTATCT 1829 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||||| || | |||| | || ||| | ||||||||| || ||||| || | Sbjct 1830 TAAATCTTAGCCTTGACATTTTCAATAGAGTCAGAGGCTTCAACATCGAGAGTGATGGTC 1889 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || |||| ||| || || || |||| ||| Sbjct 1890 TTACCAGTCAAAGTCTTAACGAAAATTTACAT 1921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932716861400