Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 >seq2 Length=2195051 Score = 131 bits (144), Expect = 2e-25 Identities = 180/251 (72%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 118614 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 118673 || ||| |||| ||||| || || | ||| | ||||||| |||||||| ||||||| Sbjct 429249 ATTACCTTATTAAGATTGAATGTAACTATCTTAGCAATTTCATAAAGCTTTTGGTAATCA 429190 Query 118674 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 118733 | | | | ||| || ||| | ||| ||| | ||| || || | ||| || || Sbjct 429189 TATTCTCTATT---TTCCTTAACAAATTTAACAAGAGAGATAGAAGCTAAATTGCAAACT 429133 Query 118734 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATG 118793 | |||||| ||||||| || | |||||| ||||| | ||| ||||| ||||| Sbjct 429132 GCAACCTCATCAGGGGCAGTGTATTCAACAATTTCAGTGCAGAGGTTAGAACTTTTAATT 429073 Query 118794 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 118853 || || | ||| | ||||||||||||| |||| || ||||||||||| |||||||| || Sbjct 429072 GTACCTAGGTTTTATTGATTTGACTTTCTGTTGCAAGCATCCTTGTAGAGCATGTAGGGA 429013 Query 118854 GTCCCCGTCTC 118864 || ||||| || Sbjct 429012 GTGCCCGTTTC 429002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432687607000