Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq28 86.0 7e-12 >seq28 Length=897071 Score = 86.0 bits (94), Expect = 7e-12 Identities = 332/510 (65%), Gaps = 15/510 (3%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAA 94500 ||||||||||| || | ||| | | | ||||| | |||||| | ||| | ||| Sbjct 62220 TGGACTGCTGACGAAATTGATTTATATCAAGATTTAAAGGATTGGGAACGTCTTACTGAC 62279 Query 94501 AATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTT 94560 || ||| | ||||| ||||| |||| || ||||| |||| || ||||| || || Sbjct 62280 AACGAACGTCACTTCATTAAATATGTCCTTGCTTTCTTCGCTGCTTCTGATGGTATCGTC 62339 Query 94561 TTTGAGAATATCAATAACAACTT--TGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCT 94618 |||| || || | | || || || ||| || ||| | | ||||| | ||| Sbjct 62340 CTTGAAAACCTCGCCGAGTAATTCATG-TG-TGAAGTCCAAATCCCCGAAGCTCGTGCCT 62397 Query 94619 TCTATGCGTATC---AGTGTCATAATGAAATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| || || | || ||| |||| | || || || ||| | | Sbjct 62398 TCTATG-GTTTCTAAATTGCCATG--GAAAATATCCACTCTGAAACTTACTCCCTTTTGA 62454 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 94735 | |||| ||||||||||||| |||| ||| | || ||| ||| | || || | Sbjct 62455 TTGACACCTATATTAAGGATGAAACTGAAAAGGAATTCCT-TTTCAAGGCCTCTCAAAAT 62513 Query 94736 TTCCGTGT-ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGT 94794 ||| ||| ||| | ||||| || | |||||| | |||||| | ||| || || | Sbjct 62514 GTCCCTGTCATTAACAAGAAGGCTCAATGGGCTCTTAAGTGGATCAATAACAA--CG-AT 62570 Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||||| ||||| | || ||||| | || ||||| |||||| |||| Sbjct 62571 AACTTTGCTTCCAGACTCATTGCTTTTGCTGCCATCGAAGGTATATTCTTCAGTGGTAGT 62630 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 ||||| || || | ||||| |||||||| | | ||||| ||| | ||||||||| Sbjct 62631 TTCTGTGCCATCTTCTGGCTTAAGAAGCGTTCTTTAATGCCCGGTTTGACCTTCTCCAAT 62690 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || || || ||| | || || || |||||| Sbjct 62691 GAACTCATTTCTAGAGATGAAGGCCTCCAC 62720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258430503000