Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq122 109 3e-19 >seq122 Length=280157 Score = 109 bits (120), Expect = 3e-19 Identities = 188/271 (69%), Gaps = 3/271 (1%) Strand=Plus/Plus Query 64972 ATCATCATCCAAATACTTCAAAATGGCATCATCCTCTTTTGGAAATATAGAACGAGTTAT 65031 |||||| ||||| || || |||| |||||| | || ||| || || | | |||| Sbjct 100440 ATCATCTTCCAAGTATTTTAAAACATGATCATCATGTTCTGGGAAAATTGCTCTTGTTAC 100499 Query 65032 TTTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGT-CTTGTCCAGTTCGT--CG 65088 |||| |||| | ||| ||||||||||| | || || || | ||| | || || || Sbjct 100500 TTTACTCAAATTTGTAAAAATATATCTTGCTGAGGCATGTTCCTTACCTCCTTGGTTACG 100559 Query 65089 TGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTG 65148 | || || | |||| | |||| || | ||||||||| || ||||| | |||||| | Sbjct 100560 AGAACCGAATTAACCAATAGGCAACAAGAGATTAATATTATTAGAACCCACAAAATTTTA 100619 Query 65149 AGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTC 65208 |||||| || | ||| | | | || | | |||||| |||||||| | || ||||| Sbjct 100620 AGCCATACCAACAATAGTAGAAGCTAGAGACTATTCACCATGATGATAAGCAGAGTGTTC 100679 Query 65209 AGAGACATATCCACTAAATTGAGCAACTTTT 65239 || ||||| ||| | |||| ||| || ||| Sbjct 100680 AGCAACATAACCAATTAATTAAGCTACCTTT 100710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679066486250