Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 3e-15 >seq9 Length=1304334 Score = 96.9 bits (106), Expect = 3e-15 Identities = 222/332 (67%), Gaps = 13/332 (4%) Strand=Plus/Plus Query 125975 TTCTAAATCTTCATAATTAATATCAAAAATTGATTTA---------TCTGTATTAATTTT 126025 ||| ||||||||| |||||| ||| ||||||||| || |||||||||| Sbjct 105819 TTCGAAATCTTCAAAATTAAAATCTTCTATTGATTTAAATTATTTATCGTTATTAATTTT 105878 Query 126026 TAATTGAGGTGGTAGATAACTATCTCTTGATAATTGTGTATGTATTGCATCCATATGATT 126085 || ||| ||||| | |||| || || | | || | || | ||| || Sbjct 105879 CAAGATAGGGAAGGGATAAGGAGTTCTTTCTAGTTAAATTTTTAATTATTCAACATGGTT 105938 Query 126086 GGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCT-CAAGTCCACATT 126144 || |||| ||| ||||| || || ||| | |||||| || || | ||| | | || Sbjct 105939 TGAGTAAACATGAGCATCACCTAAAACATGGACGAATTCTCCTACTTTCAATT--ATGTT 105996 Query 126145 CTTT-TGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAA 126203 | | ||||| | ||| || || ||||||||||| |||||||| || |||| ||||| Sbjct 105997 ATATGTGCAATCATATGAGTTAGCAAAGCATAACTAGCAATATTAAATGGAATTCCTAAT 106056 Query 126204 AATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAAT 126263 |||||| ||||| ||| | || |||||||||| || | ||| |||||| Sbjct 106057 CCCATATCACATGATCTTTAATACATCATGCAGCTTAATTTACCATCATTTACATAAAAT 106116 Query 126264 TGAAACATTGTGTGGCAAGGTGGTAATGCCAT 126295 | | |||| |||||| || |||| |||||| Sbjct 106117 TAACTCATTACGTGGCAGGGAGGTAGTGCCAT 106148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408596781567275