Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetrahymena_20borealis_20[genbank_20GCA_5F000260095.1_202012-05-01] 325 sequences; 93,506,076 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq81 93.3 3e-14 >seq81 Length=427612 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| | |||||| || | |||||| || |||||||||||||||||||||| Sbjct 245183 CCACCTCTTAATCTCAAGACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAATCGGAA 245242 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || || |||| || || ||||| || || ||||| | | | | ||| | | Sbjct 245243 AG--GGTTCTGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTATTAATCGGGGG 245300 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | ||||||||| || ||||| ||| | || | || ||||| | || ||| | Sbjct 245301 GGATACCTTCCTTATCTTGGATCTTGGCCTTGACATTTTCAATAGTGTCAGAGGCTTCAA 245360 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | ||||| ||||| || || | ||||| ||||| |||| ||| Sbjct 245361 CGTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTAACGAAAATTTACAT 245409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988974100525