Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=1844256 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 13851 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 13910 ||||||| || | |||| || || ||||||| ||| | || ||||| ||| || Sbjct 638178 TTTAGATTTTGATAAATAAAGCATCCAAAATCTGCATGTAATCCTTCATCCCTAGATATG 638237 Query 13911 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13970 ||||| || || || | |||||||||||||| | ||||| ||||| |||| |||| Sbjct 638238 AGTTCATTGCTGAAGGTCAGACCTGGCATCAATCCCCTCTTTTTCAACCAGAATAATGCA 638297 Query 13971 GCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGC 14008 ||| |||||||| || ||||||||||| || || Sbjct 638298 CAAAAACTTCCGGAAAACAAAATTCCCTCAACGGCGGC 638335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727946030600