Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2 102 9e-17 >seq2 Length=1844256 Score = 102 bits (112), Expect = 9e-17 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 21470 ATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAAT 21529 || || ||| ||||||| ||| || |||||||||||| ||| | |||||| || Sbjct 638193 ATAAAGCATCCAAAATCTGCATGTAATCCTTCATCCCTAGATATGAGTTCATTGCTGAAG 638252 Query 21530 GTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGA 21588 || | ||| ||||| ||||| |||||||| ||||| |||| || | |||| | ||| || Sbjct 638253 GTCAGACCTGGCATCAATCCCCTCTTTTTCAACCAGAATAATG-CACAAAAACTTCCGGA 638311 Query 21589 AAAGAAAATGCCCTCAACGGCAGCAAATGCAAC 21621 ||| ||||| ||||||||||| || |||| || Sbjct 638312 AAACAAAATTCCCTCAACGGCGGCGTATGCGAC 638344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900740161160