Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 509 2e-139 seq5 214 2e-50 seq2 187 3e-42 seq3 120 4e-22 >seq1 Length=3278253 Score = 509 bits (564), Expect = 2e-139 Identities = 1086/1599 (68%), Gaps = 41/1599 (3%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||||||||||| ||||| || || || ||||||||||| | ||||| | || | | Sbjct 217570 GCTATTGGTATTGATTTGGGTACCACGTACTCATGTGTCGCTGTATATAAGGATAACAAT 217629 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || || ||||||||||| || || ||||| || || || |||||||| || Sbjct 217630 GTTGAGATCATTCCAAATGACCAAGGTAATCGAACAACGCCTTCTTATGTTGCCTTCACT 217689 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | ||| ||||| |||| |||||||| |||||||| || ||||| || Sbjct 217690 GACACTGAGCGTCTGATTGGTGATGCCGCCAAAAATCAAGAGGCGCGTAACCCAGAAAAC 217749 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 ||| | || || || ||| | | ||||| | |||||| ||||| | || ||||| Sbjct 217750 ACTATTTTCGATGCTAAGAGGTTGATTGGCAGAAAGTTTGATGATAAAACTGTACAAGAT 217809 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG----GCTGATAAGCCTATGAT 195594 ||||| ||| ||||| | | | ||| ||| || || || || ||||||| || Sbjct 217810 GATATGAAGCACTGGCCAT-TCAAG--GTTACCAATGGCCCAAGCGGA-AAGCCTAATAT 217865 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTC-CCGAAGAAATTTCGTCTATG 195652 | | ||| || || ||| | ||||| ||| || | | ||||||| || || |||| Sbjct 217866 TGAAGTTACCTTCCAGGGTCAAAAGAAGACA--TTCCACGCCGAAGAGATCTCCAGTATG 217923 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || | ||||| |||||||||| ||| ||| | | | ||||||| || | || ||||| Sbjct 217924 GTTCTTATTAAAATGAAGGAGATTGCTGAAGCATACTTGGGTAAGACGATCAAGGATGCT 217983 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 || | ||||| || || || |||| |||||| ||||| || || || ||||| |||| | Sbjct 217984 GTCATTACTGTCCCCGCCTATTTCAATGATTCCCAACGTCAAGCTACCAAGGATGCTGGT 218043 Query 195773 GCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 | ||||| || | || | | |||||||| |||||||| || || ||||| || || Sbjct 218044 ACAATTGCCGGGTTGAATGTTATGAGAATTATTAATGAACCCACCGCAGCTGCTATCGCC 218103 Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 |||||| |||| ||||| | | | || || ||||| ||||| || |||||||||||| Sbjct 218104 TATGGTTTGGATAAGAAGAGCGGCTCTGAGAAGAATGTTTTGATTTTCGATCTCGGTGGT 218163 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 || || |||||||| |||| | ||||||| |||||| || || || |||||||| Sbjct 218164 GGAACCTTTGATGTTAGTATTCTGACAATTGAAGATGGTATTTTTGAGGTTAAGGCTACC 218223 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT----CATT- 196007 ||||||||||| || | || || || || || || || |||| | || |||| Sbjct 218224 GCTGGTGATACCCACTTGGGAGGCGAGGACTTTGA--CA-ATCTT-TTGGTGGAACATTG 218279 Query 196008 TGTCTGATGAGTTC---CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTC 196064 |||| | ||| ||| |||| ||| ||| ||| || | || ||| | || | Sbjct 218280 TGTCCG-TGACTTCATGCGTCTAAATAATGGTAAAAATCTATCAACAAACAAGCGTGCAC 218338 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC---TTCTACGGCTC 196121 | | || | ||||| || ||| | || || || ||| || ||||| | | Sbjct 218339 TGAGGCGTTTGAGGACACATTGCGAAAGGGCAAAGCGTGTTCTTTCAAGTTCTA---CAC 218395 Query 196122 AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181 || | | ||||| | ||||| ||| ||| || ||||| | | | || || |||| Sbjct 218396 AAGCTACTATTGAGTTGGATTCCCTGTATGAGGGTATTGATTACAACACTACCATTAGTA 218455 Query 196182 GTGCACGTTTTGAAGAGTT---AAACTCTGATTTGTTTAGGAAGT-GTATGGAACCTGTT 196237 | || || ||||||||||| ||| || || | ||||| ||| ||||| Sbjct 218456 GGGCCCGCTTTGAAGAGTTGTGTAAC---GAGAAATTCA-GAAGTACCTTGGTTCCTGTA 218511 Query 196238 GAACAAGTACTTCGTGACGCAAAG-ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296 ||| ||| ||| | | | | || ||| ||| | ||||| |||| | || Sbjct 218512 GAA-AAGGCCTTGGAATCTAGTGGTCTTGACAAGAGAAAGATACATGAAGTTGTTTTGGT 218570 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || ||| | ||||| ||||||||||| | | ||||||| ||| ||| Sbjct 218571 TGGTGGTTCCACCAGGATTCCCAAGATTCAACAACTCATAAAGGGCTTCTTTAATGGTAA 218630 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 ||| || | |||||||| ||||| || || |||||||| || || || || || Sbjct 218631 AGAACCGTGCAGGTCTATCAACCCAGATGAGGCTGTAGCTTATGGCGCTGCTGTACAAGC 218690 Query 196417 TGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGC 196476 ||||||||| || ||| | | | || |||| || ||| || | | |||||||| Sbjct 218691 TGCTATTCTGTCTGGTAACCAGTCTGAGAAAATCCAGGAACTTTTGTTGTTGGATGTTGC 218750 Query 196477 ACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAA 196536 ||| ||||||| ||| | ||||| || ||||||||||||||| |||| | | || Sbjct 218751 ACCATTATCCCTTGGTTTGGAAACTGCTGGTGGTGTTATGACTGTTCTTATCAAGCGTAA 218810 Query 196537 CACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGG 196596 ||| || ||||| || ||||| | || | || | || | ||| ||||| ||| Sbjct 218811 CACCACAATTCCTACAAAGAAAAATCAGATATTCACGACCAACGAAGATCATCAAGAAGG 218870 Query 196597 TGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG 196656 || | ||| ||||| | |||||| ||| | | | |||||||| |||| ||||| Sbjct 218871 AGTCCTTATCCAAGTTTTTGAAGGTGAAAGGGCTATGACCAAGGATAATAATCTTCTTGG 218930 Query 196657 AACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTG 196716 | ||| | |||| || ||| | | ||||| | ||||| ||||| ||| | || Sbjct 218931 TAAATTCCACTTGAGTGGCATTGCTCCGGCACCTCGTGGTGTCCCACAAATTGAAGTCAC 218990 Query 196717 CTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAA 196776 || ||||| || || ||||||||| | |||||||| ||| ||| ||| | | || || Sbjct 218991 ATTTGATATTGATGCTAATGGAATTTTGAACGTCACTGCTATGGATAAGTCCACCGGAAA 219050 Query 196777 ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACG 196836 ||| || | | ||| || ||||| ||||| | | || || | |||||||| || Sbjct 219051 ATCGGAGCATGTCACGATCACTAATGATAAGGGAAGATTATCACAGCAAGAAATTGACCG 219110 Query 196837 TATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 |||||| || || || ||||| || | ||| || ||||| Sbjct 219111 TATGGTCCAGGAAGCTGAAAAATATAAGGACGAGGACGA 219149 Score = 132 bits (146), Expect = 6e-26 Identities = 229/327 (70%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| ||||| ||||||| | | || | || || | | || || | ||| Sbjct 1660558 AAGATGAAGGAAACTGCCGAATCTTACCTTGGCAGAAAGGTTAGCAAGGCTGTCATCACT 1660499 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || |||| |||||||||||| ||||| || ||||| |||| || || Sbjct 1660498 GTCCCTGCCTATTTCAATGATTCACAACGTCAGGCTACTAAGGATGCTGGAAAAATCGCT 1660439 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || ||| | ||| || |||||||||||||| || || || || || | |||| ||| || Sbjct 1660438 GGCCTAGA-TGTACTCAGAATTATCAATGAGCCCACTGCCGCAGCTCTAGCTTTTGGACT 1660380 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 |||| ||| | || | | | | || | | | | ||| | ||||||||||| || Sbjct 1660379 TGACA--AAC-ACGATGGAAAGACAATCGCA---GTATACGATTTGGGTGGTGGTACATT 1660326 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 |||| | || || | | || || ||| |||| ||||| |||||||| ||| | Sbjct 1660325 TGATATTTCGGTTTTGGAGATCCTCGGCGGTGTATTTGAAGTCAAGGCTACCAATGGCAA 1660266 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| ||| || ||||||||||| || Sbjct 1660265 TACCTCTCTTGGAGGTGAAGATTTTGA 1660239 >seq5 Length=831028 Score = 214 bits (236), Expect = 2e-50 Identities = 866/1343 (64%), Gaps = 30/1343 (2%) Strand=Plus/Minus Query 78044 TTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCT 78103 |||| ||||| || || || | ||||||||||| || || ||||| ||||| || Sbjct 47744 TTTACACACGCTACTCCAACGCTATTTAATGCAGGAACCAATCGCCCACAAATGTCTTCC 47685 Query 78104 TGTTTCCTACTTGCAAATA-AGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGA 78162 ||||| | ||| | || | || || ||| || || || | | || || || | Sbjct 47684 TGTTTTTTG-TTGGATATGCAAGATGATTCTCTTGCAGGAATTTTCAATACACTGACGCA 47626 Query 78163 GTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGC 78222 |||||| || || | |||||||| ||||| ||| |||||| | | ||||| Sbjct 47625 GTGTGCCTTCATCAGCAAATCAGCTGGTGGAATAGGCCTTGCAATTCACAAAATACGTGC 47566 Query 78223 AAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAG 78282 | || ||| | || || ||||| |||||| |||| ||| |||| ||| | | Sbjct 47565 GAGTGGTTCATATATTCGGGGTACAAATGGACAGTCTAATGGTATTGTTCCAATGTTGCG 47506 Query 78283 GGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAG--GAAGGGGT-CATT 78339 | || || | || || ||||| | || | |||| ||| |||||||| | || Sbjct 47505 TATCTTTAACACAACCGCCAAGTATGTTGATCAGGGGGGTGGTAAAAGAAGGGGTTCGTT 47446 Query 78340 CGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAA 78399 || || || | || || ||||| || ||| || | | | ||||| || || || Sbjct 47445 TGCCATATATTTGGAGCCATGGCATGCGGATATATTTAAGATGTTGGATCTGCGCAAAAA 47386 Query 78400 CCAGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCT 78459 ||| |||| ||||| || || ||| | ||| ||| | ||||| || ||| | Sbjct 47385 CCACGGTGCAGAGGATTTGAGAGCAAGAGATCTCTTCTATGCGCTATGGATCCCTGATTT 47326 Query 78460 TTTTATGAAGAGAGTTGAGG--AAGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACT 78517 |||||||| | ||||||| || || || ||| |||| | || || || || Sbjct 47325 GTTTATGAAACGCGTTGAGGCTAATGAA--AATTGGACTCTCATGTGCCCTGACGAGTGC 47268 Query 78518 AAGGGTCTTTCAGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAG 78577 | ||| | | || || | || || ||||| || | ||||| || || ||| | Sbjct 47267 AGAGGTTTGTATGAAGTCTGGGGTGATGAATTTGAGGCTCTTTACACCAAGTATGAACAA 47208 Query 78578 GAAGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAGT 78637 | ||| | | |||||| || ||| | ||||| || || | ||||| Sbjct 47207 GCTGGTTTGGGCCGTAAGACCATCCCCGCACAAAAGTTATGGTTTGCAATCTTACAAAGT 47148 Query 78638 CAAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTAAC 78697 |||| || || || || ||||||||||| ||||| || ||| ||| ||| |||||| Sbjct 47147 CAAATTGAAACTGGTACGCCGTATATGCTTTACAAGGATGCCTGCAACGCAAAATCTAAC 47088 Query 78698 CAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACG 78757 |||||||| || ||| ||| ||| || ||| | ||| |||||| | | || || Sbjct 47087 CAAAAGAATCTGGGTACCATAAAATCTTCCAACTTGTGCTGTGAAATTGTACAGTATACT 47028 Query 78758 GATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGAT 78817 |||| || ||| ||||| ||||| | | || |||||| |||| | ||||||| || Sbjct 47027 GATAGCAAAGAAGTTGCTGTCTGTAACTTGGCTTCAATCGCTTTACCTATGTTTGTTAAT 46968 Query 78818 CGAGAATTAAAGACATTTGATTATTCA--AAGCTCCACGAAATTACAAAAATCGTAACTA 78875 || ||||| |||||| |||| ||||| || | || || || | || Sbjct 46967 AAGGAGGAGAAGACTTTTGAT--TTCAAGAAGCTTTACAAGATCTCACGTGTCATTACAT 46910 Query 78876 AAAATTTAAATCGTGTAATTGACCGTAACTACTACCCAGTCGAGACTGCTAAATATTCTA 78935 | ||||| || | | ||||| | |||||||||||||| || |||| ||||| | Sbjct 46909 ACAATTTGAACCAAATCATTGATAGAAACTACTACCCAGTGAAGGAAGCTAGGTATTCAA 46850 Query 78936 ATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGATGTATTCAACTTGT 78995 || | || || || |||||| | || |||||||| || || ||| |||| |||| Sbjct 46849 ATTTCCGTCACAGGCCTATTGGTGTTGGAGTTCAAGGTTTAGCTGATACGTTCATGTTGT 46790 Query 78996 GTGGTCT-TCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAGACT 79054 || || ||| || || | || || | ||| |||| | ||| || || ||| Sbjct 46789 -TGCGCTATCCATTTGAATCTGATGAAGCCAGGGAGCTGAACAAGCGTATATTTGAAACT 46731 Query 79055 ATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTT--GCTGAAATTAATGGGCCTTATG 79112 |||||| |||| | | || | ||| | ||| || |||| |||| | ||||| Sbjct 46730 ATTTATTATGCGTGTCTGGATG--AGTCTATCTCTTTGGCCGAAAAGTATGGTCATTATG 46673 Query 79113 A-GAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGT 79171 | | || | ||||| || ||||| ||||||||| | || ||||| |||| | | Sbjct 46672 ACTCATATCCA-GGTTCGCCTGCTTCTCAAGGTCTTTTGCAGTTCGATCTTTGGGGTGCT 46614 Query 79172 GAAGCTAAATACAGTGGTCGTTACGATTGGGATGCAATGA--GAAAGCGTGTAATGACGA 79229 | | | ||| | || || |||||||| | | | ||| || || || Sbjct 46613 ACTGTTGATAACA---AGCTTTGGGACTGGGATGCCCTTAAGGCAAGAATGAAAAAAC-- 46559 Query 79230 AGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCC 79289 | ||| |||||||| | | || | || || ||||| ||||| || || ||||||| Sbjct 46558 ATGGTTTGAGAAACTCTTTATTCTTGGCTCCTATGCCTACTGCCTCTACCTCTCAGATTT 46499 Query 79290 TCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATT-A 79348 | || |||||||| | ||| || ||||| |||| ||||| ||| | || ||| | Sbjct 46498 TGGGAAATAATGAATCTTTCGAGCCATATACTAGTAACATCTATTACAGACGTGTATTGA 46439 Query 79349 GCTGGTGAATTTGTTGTGGTTAA 79371 || |||||||| |||| ||||| Sbjct 46438 GC-GGTGAATTCTTTGTTGTTAA 46417 >seq2 Length=1844256 Score = 187 bits (206), Expect = 3e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| ||||| || || || ||||| || || || || || || ||||| Sbjct 534839 GTGGTATGCAAATTTTTGTAAAGACTCTCACTGGCAAGACCATTACTCTTGAAGTTGAAC 534898 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| || || |||| || ||||||||||| ||||| |||||||| || | Sbjct 534899 CTAGTGACACAATTGAGAATGTCAAGGCAAAGATTCAAGACAAGGAGGGCATTCCCCCGG 534958 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||| || | |||||||||||||| || || || || |||||||| | |||||| Sbjct 534959 ATCAGCAGCGTTTGATTTTTGCTGGTAAGCAACTGGAGGACGGACGTACATTGTCTGATT 535018 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||||||| |||||| ||| | ||||| ||| | || |||||| Sbjct 535019 ACAACATTCAAAAGGAGAGTACTCTTCACTTGGTTCTTAGGTTGCGCGGTGGT 535071 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| || || || ||||| || || |||||||| ||||| ||| | Sbjct 1771979 ATGCAAATTTTTGTAAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 1772038 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||||||| || || |||| ||||||||||| || || || |||||||| || || ||| Sbjct 1772039 GACACAATTGAAAATGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCTCCAGACCAG 1772098 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | |||||||||||||| || || || || || ||||| ||| | ||||| ||| Sbjct 1772099 CAGAGGTTGATTTTTGCTGGTAAGCAACTGGAGGACGGTCGTACTCTCTCGGATTATAAC 1772158 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||||||||| |||||| ||| | ||||| ||| | || |||||| Sbjct 1772159 ATTCAAAAGGAGAGTACTCTTCACTTGGTTCTTAGGTTGCGTGGTGGT 1772206 Score = 147 bits (162), Expect = 3e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 ||||||||| ||||| || || || ||||| || || |||||||| ||||| ||| | Sbjct 534615 TATGCAAATTTTTGTAAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 534674 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||||| || || || |||| || ||||||||||| ||||| || || || || || || Sbjct 534675 CGACACGATTGAGAATGTCAAGGCAAAGATTCAAGACAAGGAGGGTATCCCTCCAGACCA 534734 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 || | | ||||| || || ||||| || || || || || || ||| | || ||||| Sbjct 534735 ACAGAGGTTGATTTTCGCCGGCAAACAACTGGAGGACGGTCGCACTCTCTCAGACTACAA 534794 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||||||| ||||| ||| | ||||| ||| | || |||||| Sbjct 534795 CATTCAAAAGGAGAGCACTCTTCACTTGGTTCTTAGGTTGCGTGGTGGT 534843 >seq3 Length=2150608 Score = 120 bits (132), Expect = 4e-22 Identities = 196/279 (70%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 ||| || | ||||| ||||| || || | |||||| ||||| ||||| || ||||| ||| Sbjct 1735396 GCAATTATCACTGTCCCTGCCTATTTTAATGATTCTCAACGTCAGGCTACTAAGGATGCT 1735337 Query 195770 GCTGCTATTGCGGGTCTAAACTGTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAAT 195828 | | | ||||| ||| | | ||| || | ||||||||||| ||||| || || || || Sbjct 1735336 GGTACAATTGCCGGTTTGGA-TGTGGTTCGTATTATCAATGAGCCAACTGCTGCCGCTAT 1735278 Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGG 195888 ||| |||||| | |||||| ||| | ||| || | | || || | ||| | || Sbjct 1735277 TGCCTATGGTATTGACAAGGCCAATGTAGAATCGAACATTTTAGTG---TACGATTTAGG 1735221 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948 ||||||||| |||||||| || | || | || ||| | || ||||| | Sbjct 1735220 TGGTGGTACCTTTGATGTTTCTTTGCTTTTGTTAGACTCTGGCGTTTTTGAAGTCGTTGG 1735161 Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| |||||| |||||| | || |||||||| || || Sbjct 1735160 AACTGGTGGTGACACTCATTTGGGAGGTGAAGACTTTGA 1735122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862325990480