Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=1844256 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || ||| | || ||||| |||||||| | ||| || ||| Sbjct 534844 ATGCAAATTTTTGTAAAGACTCTCACTGGCAAGACCATTACTCTTGAAGTTGAACCTAGT 534903 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || || |||||| ||||| || ||| | ||| |||||| Sbjct 534904 GACACAATTGAGAATGTCAAGGCAAAGATTCAAGACAAGGAGGGCATTCCCCCGGATCAG 534963 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | | |||| ||| ||||| || |||||||| | | ||| || | ||||||||| Sbjct 534964 CAGCGTTTGATTTTTGCTGGTAAGCAACTGGAGGACGGACGTACATTGTCTGATTACAAC 535023 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || ||| | ||| |||| | || |||| || || Sbjct 535024 ATTCAAAAGGAGAGTACTCTTCACTTGGTTCTTAGGTTGCGCGGTGG 535070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841554716437