Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 1e-11 >seq2 Length=1844256 Score = 86.0 bits (94), Expect = 1e-11 Identities = 141/202 (70%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || ||||| || || || || ||| | ||||| ||| | ||||||| | Sbjct 534852 TTTTGTAAAGACTCTCACTGGCAAGACCATTACTCTTGAAGTTGAACCTAGTGACACAAT 534911 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || || || ||| ||||| || | | Sbjct 534912 TGAGAATGTCAAGGCAAAGATTCAAGACAAGGAGGGCATTCCCCCGGATCAGCAGCGTTT 534971 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || || || ||||| |||| || ||| | || ||| | ||||||||| | || || Sbjct 534972 GATTTTTGCTGGTAAGCAACTGGAGGACGGACGTACATTGTCTGATTACAACATTCAAAA 535031 Query 206358 AGAGTCTACTCTTCACCTTGTT 206379 ||| |||||||||| | ||| Sbjct 535032 GGAGAGTACTCTTCACTTGGTT 535053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820663721289