Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 123 3e-23 >seq2 Length=1844256 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 134523 TCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAA 134581 ||||||||||||||||| || | ||| | | | ||| || || || || || ||||| Sbjct 535034 TCCTTTTGAATGTTGTAATCAGACAATG-TACGTCCGTCCTCCAGTTGCTTACCAGCAAA 534976 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 |||||||||||||||||| || || ||||| || || |||||||| ||| ||||| Sbjct 534975 AATCAAACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTGACATT 534916 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | |||||| | ||| || || ||||||||||| || || || | ||| || || Sbjct 534915 CTCAATTGTGTCACTAGGTTCAACTTCAAGAGTAATGGTCTTGCCAGTGAGAGTCTTTAC 534856 Query 134702 GAAAATTTGCAT 134713 ||||||||||| Sbjct 534855 AAAAATTTGCAT 534844 Score = 105 bits (116), Expect = 7e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||| |||||||||||||||||||| | ||| || ||| || || || Sbjct 534819 GTGAAGAGTGCTCTCCTTTTGAATGTTGTAGTCTGAGAGAGTGCGACCGTCCTCCAGTTG 534760 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 |||||| || |||||||| | ||| || || || || || || || || |||||||| || Sbjct 534759 TTTGCCGGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCCTCCTTGTCTTGAATCTT 534700 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | ||||| || | |||||| | || || || || || ||||| || || || Sbjct 534699 TGCCTTGACATTCTCAATCGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 534640 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTG 134717 | ||| || || ||||||||||| ||| Sbjct 534639 GAGAGTCTTTACAAAAATTTGCATATTG 534612 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 134523 TCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 |||||||||||||| || || | || || ||| || || || || || |||||| Sbjct 1772169 TCCTTTTGAATGTTATAATCCGAGAGAGTACGACCGTCCTCCAGTTGCTTACCAGCAAAA 1772110 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 ||||| | |||||| || || || ||||| ||||| || ||||| || ||||| Sbjct 1772109 ATCAACCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACATTT 1772050 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||||| | || || || || || ||||| || || || | ||| || || Sbjct 1772049 TCAATTGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTTACA 1771990 Query 134703 AAAATTTGCATTTTG 134717 ||||||||||| ||| Sbjct 1771989 AAAATTTGCATCTTG 1771975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398343142680