Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 515 1e-140 seq2 183 9e-41 seq3 118 3e-21 seq5 113 1e-19 seq4 89.7 2e-12 seq6 84.2 7e-11 >seq1 Length=3278253 Score = 515 bits (570), Expect = 1e-140 Identities = 1004/1472 (68%), Gaps = 27/1472 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || || ||||| ||||| || || || ||||| ||||| | | || | | Sbjct 217570 GCTATTGGTATTGATTTGGGTACCACGTACTCATGTGTCGCTGTATATAAGGATAACAAT 217629 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||| ||||||| |||||||| |||||||||| || || ||||| || || Sbjct 217630 GTTGAGATCATTCCAAATGACCAAGGTAATCGAACAACGCCTTCTTATGTTGCCTTCACT 217689 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||||||| ||||||||||| | || |||||||||| || ||| ||| |||| Sbjct 217690 GACACTGAGCGTCTGATTGGTGATGCCGCCAAAAATCAAGAGGCGCGTAACCCAGAAAAC 217749 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || |||| ||||||||| | | ||||| |||| ||| ||| ||| || |||| | Sbjct 217750 ACTATTTTCGATGCTAAGAGGTTGATTGGCAGAAAGTTTGATGATAAAACTGTACAAGAT 217809 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACG--GTGATAAACCAATTATTG 349496 ||| | || || | || || | ||| |||| | | | | || || | ||||| Sbjct 217810 GATATGAAGCACTGGCCATTCAAGGTTA--CCAATGGCCCAAGCGGAAAGCCTAATATTG 217867 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTAC-CCGAAGAAATTTCATCAATGGTT 349555 | ||| | | ||| || || || | || || ||||||| || || |||||| Sbjct 217868 AAGTTACCTTCCAGGGTCAA-AAGAAGACATTCCACGCCGAAGAGATCTCCAGTATGGTT 217926 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | ||||||||||||| |||||||||||||| || ||| | || | | |||||||| Sbjct 217927 CTTATTAAAATGAAGGAGATTGCTGAAGCATACTTGGGTAAGACGATCAAGGATGCTGTC 217986 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 |||||||| || |||||||| |||||| |||| ||| || || || |||||||| | Sbjct 217987 ATTACTGTCCCCGCCTATTTCAATGATTCCCAACGTCAAGCTACCAAGGATGCTGGTACA 218046 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| ||||| |||||| | ||||| |||||||||||||| || || || || || ||| Sbjct 218047 ATTGCCGGGTTGAATGTTATGAGAATTATTAATGAACCCACCGCAGCTGCTATCGCCTAT 218106 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || | ||||| | ||| | | || || ||| || | ||||| ||| | |||||||| Sbjct 218107 GGTTTGGATAAGAAGAGCGGCTCTGAGAAGAATGTTTTGATTTTCGATCTCGGTGGTGGA 218166 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 || |||||||| | || ||| ||||||| || |||||||| ||||| || || ||| Sbjct 218167 ACCTTTGATGTTAGTATTCTGACAATTGAAGATGGTATTTTTGAGGTTAAGGCTACCGCT 218226 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 |||||||| || | || || || || ||||| |||| | | || |||| ||| Sbjct 218227 GGTGATACCCACTTGGGAGGCGAGGACTTTGACAATCTTTTGGTGGAACATTGTGTCCGT 218286 Query 349916 GAATTTAAGCGTC------AAGCTAAAATTGATAT-TGGAGATAATCCTAGAGCAATGCG 349968 || || | ||||| | | ||||| | ||| | | || | | ||| || | Sbjct 218287 GACTTCATGCGTCTAAATAATGGTAAAAAT-CTATCAACAAACAAGC---GTGCACTGAG 218342 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGT-TCCTTATCATCTACTACCCAAACCT 350027 || | || || || ||| | || |||||| | ||| ||| | |||| ||| | Sbjct 218343 GCGTTTGAGGACACATTGCGAAAGGGCAAAGCGTGTTCTT-TCAAGTTCTACACAAGCTA 218401 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 ||||||| | ||||| || ||| || | |||| | | | |||| | || | Sbjct 218402 CTATTGAGTTGGATTCCCTGTATGAGGGTATTGATTACAACACTACCATTAGTAGGGCCC 218461 Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 | |||||||| || |||| || || ||| || ||| |||||| ||||| | | Sbjct 218462 GCTTTGAAGAGTTGTGTAACGAGAAATTCAGAAGTACCTTGGTTCCTGTAGAAAAGGCCT 218521 Query 350148 TAAAAGATGCAAAAATGTC----CAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGT 350203 | || | | ||| ||| | |||| ||||||| ||||| ||||||||| Sbjct 218522 TGGAATCT----AGTGGTCTTGACAAGAGAAAGATACATGAAGTTGTTTTGGTTGGTGGT 218577 Query 350204 TCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT 350263 || || | ||||| || ||||||| | || | || |||||||| |||||||| Sbjct 218578 TCCACCAGGATTCCCAAGATTCAACAACTCATAAAGGGCTTCTTTAATGGTAAAGAACCG 218637 Query 350264 TCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATT 350323 | || || || || |||||||| ||||| || ||||| |||||||| || || ||||| Sbjct 218638 TGCAGGTCTATCAACCCAGATGAGGCTGTAGCTTATGGCGCTGCTGTACAAGCTGCTATT 218697 Query 350324 TTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 | ||||| || || | ||||| | || || || | | ||||| | ||| | Sbjct 218698 CTGTCTGGTAACCAGTCTGAGAAAATCCAGGAACTTTTGTTGTTGGATGTTGCACCATTA 218757 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 || ||||| || |||||| |||||| || |||||||||||||| | || | || Sbjct 218758 TCCCTTGGTTTGGAAACTGCTGGTGGTGTTATGACTGTTCTTATCAAGCGTAACACCACA 218817 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 | |||||||| || || | || | || | |||| |||| || || Sbjct 218818 ATTCCTACAAAGAAAAATCAGATATTCACGACCAACGAAGATCATCAAGAAGGAGTCCTT 218877 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || ||||| |||||||||||| | ||| || || ||||||||| ||||| |||| Sbjct 218878 ATCCAAGTTTTTGAAGGTGAAAGGGCTATGACCAAGGATAATAATCTTCTTGGTAAATTC 218937 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 | | |||| ||| | || ||| | || || || || ||||||||| | || ||| Sbjct 218938 CACTTGAGTGGCATTGCTCCGGCACCTCGTGGTGTCCCACAAATTGAAGTCACATTTGAT 218997 Query 350624 ATTGATTCAAATGGTATTTTAAATGTTACCGC 350655 |||||| | ||||| ||||| || || || || Sbjct 218998 ATTGATGCTAATGGAATTTTGAACGTCACTGC 219029 Score = 192 bits (212), Expect = 2e-43 Identities = 571/879 (65%), Gaps = 9/879 (1%) Strand=Plus/Minus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 || || ||||| ||||||| |||| |||||||| |||||||| ||||| ||||| || Sbjct 219023 ACGTTCAAAATTCCATTAGCATCAATATCAAATGTGACTTCAATTTGTGGGACACCACGA 218964 Query 182979 GGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTT 183038 || || | ||| ||| | || |||| ||| | ||||||||| || || | Sbjct 218963 GGTGCCGGAGCAATGCCACTCAAGTGGAATTTACCAAGAAGATTATTATCCTTGGTCATA 218904 Query 183039 GCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 || || || |||||| | ||||| ||| ||| || |||| ||| | || | Sbjct 218903 GCCCTTTCACCTTCAAAAACTTGGATAAGGACTCCTTCTTGATGATCTTCGTTGGTCGTG 218844 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACT 183158 || | || ||||| || ||||||| || | || ||| | || |||||||| || Sbjct 218843 AATATCTGATTTTTCTTTGTAGGAATTGTGGTGTTACGCTTGATAAGAACAGTCATAACA 218784 Query 183159 TCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGAT 183218 | | |||||||| || || | ||||||||||| ||||| | || || | || Sbjct 218783 CCACCAGCAGTTTCCAAACCAAGGGATAATGGTGCAACATCCAACAACAAAAGTTCCTGG 218724 Query 183219 GTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACA 183278 |||| || || | || || | ||| |||||||| ||||| || ||||| || ||| Sbjct 218723 ATTTTCTCAGACTGGTTACCAGACAGAATAGCAGCTTGTACAGCAGCGCCATAAGCTACA 218664 Query 183279 GCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATT 183338 || ||||||||||| || || | | |||||| |||||||| || | | | | Sbjct 218663 GCCTCATCTGGGTTGATAGACCTGCACGGTTCTTTACCATTAAAGAAGCCCTTTATGAGT 218604 Query 183339 TGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACTT 183398 |||||||| || ||||| || || |||||||| || || || ||||||| || || || Sbjct 218603 TGTTGAATCTTGGGAATCCTGGTGGAACCACCAACCAAAACAACTTCATGTATCTTTCTC 218544 Query 183399 TTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAA 183458 || || | || || | ||||| ||||| ||| || |||| ||| Sbjct 218543 TTGTCAAGACCACTAGATTCCAAGGCCTTTTCTACAGGAACCAAGGTACTTCTGAATTTC 218484 Query 183459 TCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTA 183518 || |||| |||||||| || | || ||| | | | | | |||||||| | | Sbjct 218483 TCGTTACACAACTCTTCAAAGCGGGCCCTACTAATGGTAGTGTTGTAATCAATACCCTCA 218424 Query 183519 TATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGT 183578 || | |||||| | ||||| | | ||||||||| ||| | | || || | | Sbjct 218423 TACAGGGAATCCAACTCAATAGTAGCTTGTGTAGAACTTGAAAGAACACGCTTTGCCCTT 218364 Query 183579 TCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTG-TAATATCTTGT----- 183632 || || ||| || | || | | || | | || | || | ||| || | Sbjct 218363 TCGCAATGTGTCCTCAAACGCCTCAGTGCAC---GCTTGTTTGTTGATAGATTTTTACCA 218307 Query 183633 TTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCA 183692 |||| | | | || ||| | | |||||| | || | ||||| || || Sbjct 218306 TTATTTAGACGCATGAAGTCACGGACACAATGTTCCACCAAAAGATTGTCAAAGTCCTCG 218247 Query 183693 CCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTT 183752 || || || || ||||| ||||| ||||| ||||| ||||| || || |||||||| | Sbjct 218246 CCTCCCAAGTGGGTATCACCAGCGGTAGCCTTAACCTCAAAAATACCATCTTCAATTGTC 218187 Query 183753 AAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | ||| |||||||| || |||||||| | ||| ||| Sbjct 218186 AGAATACTAACATCAAAGGTTCCACCACCGAGATCGAAA 218148 Score = 118 bits (130), Expect = 3e-21 Identities = 152/204 (75%), Gaps = 12/204 (6%) Strand=Plus/Plus Query 132633 TCAAAATATGGAATATATTTTCCTTGTTTATACCATTTTTCAATAACAGTCCAAGGTACA 132692 |||||||| || ||||||||||||| ||||| |||||||||||| | || |||| | Sbjct 214416 TCAAAATAGGGGATATATTTTCCTTCTTTATGCCATTTTTCAATTTCCGTAAAAGGGGTA 214475 Query 132693 ACTTCACAAGGATAAACCTTCATCTGATCTGGACATATAAT-----ACTA-TACACATA- 132745 || || |||||||||| |||| |||||| | | | |||| |||| | | ||| Sbjct 214476 ACCTCGCAAGGATAAATCTTCCACTGATCAG--CCTGTAATAGTTCACTACTCAAGATAA 214533 Query 132746 -ATCAAACATGTCTCGATCTATTTGAGGAGTTGC-CCCCGGTAAATCAGGCATAATATGA 132803 ||||||||| ||| ||| |||||| ||||| |||| ||||||||| ||||| Sbjct 214534 GATCAAACATTTCTAAATCCATTTGA-ACGTTGCTAGATGGTAGATCAGGCATTATATGT 214592 Query 132804 ATATCAATCTTAAAACAATTATCT 132827 ||||||| ||| ||||| || ||| Sbjct 214593 ATATCAACCTTGAAACAGTTCTCT 214616 >seq2 Length=1844256 Score = 183 bits (202), Expect = 9e-41 Identities = 181/233 (78%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 |||| |||||| || || || ||||| | ||||||||| ||| |||||||| || ||| Sbjct 535075 TACA-ACCACCGCGCAACCTAAGAACCAAGTGAAGAGTACTCTCCTTTTGAATGTTGTAA 535017 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 ||||| ||||| || || || || ||||| || |||||||| || | ||| |||||||| Sbjct 535016 TCAGACAATGTACGTCCGTCCTCCAGTTGCTTACCAGCAAAAATCAAACGCTGCTGATCC 534957 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || ||||| || || || || ||||| || || || ||||| ||||| | ||| ||| Sbjct 534956 GGGGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTGACATTCTCAATTGTGTCACTAGGT 534897 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||||| |||| ||||| || || || || ||||||||||| ||||| Sbjct 534896 TCAACTTCAAGAGTAATGGTCTTGCCAGTGAGAGTCTTTACAAAAATTTGCAT 534844 Score = 158 bits (174), Expect = 4e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| || || ||||| | ||||||||| ||| |||||||| |||||||| Sbjct 1772208 ATACCACCACGCAACCTAAGAACCAAGTGAAGAGTACTCTCCTTTTGAATGTTATAATCC 1772149 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || ||||| || |||||||| || | | ||||| || ||| Sbjct 1772148 GAGAGAGTACGACCGTCCTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGA 1772089 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || ||||| |||||||| || || || ||||| ||||| | || || || Sbjct 1772088 GGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACATTTTCAATTGTGTCGCTGGGCTCG 1772029 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| || || || || ||||||||||| ||||| Sbjct 1772028 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTTACAAAAATTTGCAT 1771979 Score = 131 bits (144), Expect = 5e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| || || ||||| | |||||||| ||| |||||||| || | Sbjct 534850 TTTGCATACCACCACGCAACCTAAGAACCAAGTGAAGAGTGCTCTCCTTTTGAATGTTGT 534791 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || |||||||| || || || || | | || || | Sbjct 534790 AGTCTGAGAGAGTGCGACCGTCCTCCAGTTGTTTGCCGGCGAAAATCAACCTCTGTTGGT 534731 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || || || || || ||||| || || || ||||| ||||||| || | Sbjct 534730 CTGGAGGGATACCCTCCTTGTCTTGAATCTTTGCCTTGACATTCTCAATCGTGTCGCTGG 534671 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || ||||| || | ||||| || || || || ||||||||||| ||||| Sbjct 534670 GCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTTACAAAAATTTGCAT 534616 >seq3 Length=2150608 Score = 118 bits (130), Expect = 3e-21 Identities = 191/274 (70%), Gaps = 3/274 (1%) Strand=Plus/Minus Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 |||| ||||| || ||||||||||||||| | || ||| || || || |||||||| | Sbjct 1735392 TTATCACTGTCCCTGCCTATTTTAATGATTCTCAACGTCAGGCTACTAAGGATGCTGGTA 1735333 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 ||||| || || |||| | | || || ||||| || |||||||| || ||||| | Sbjct 1735332 CAATTGCCGGTTTGGATGTGGTTCGTATTATCAATGAGCCAACTGCTGCCGCTATTGCCT 1735273 Query 349734 ATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793 |||| |||| || | || |||| || ||| | | | ||||||||||||| Sbjct 1735272 ATGGTATTGACAAGGCCAATG---TAGAATCGAACATTTTAGTGTACGATTTAGGTGGTG 1735216 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTG 349853 |||| |||||||| || | || | || || |||||||||| | ||||| Sbjct 1735215 GTACCTTTGATGTTTCTTTGCTTTTGTTAGACTCTGGCGTTTTTGAAGTCGTTGGAACTG 1735156 Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 |||||| || ||| | || || ||||| ||||| Sbjct 1735155 GTGGTGACACTCATTTGGGAGGTGAAGACTTTGA 1735122 >seq5 Length=831028 Score = 113 bits (124), Expect = 1e-19 Identities = 291/436 (67%), Gaps = 8/436 (2%) Strand=Plus/Plus Query 202368 TGGTTTTCTGCGTAGATAATATATTCCAGTTTTTAGTCCTTGTTTCCAACTATAAAAATG 202427 ||||| | ||||||||||||| | || ||||| ||||| | |||||| | |||||| || Sbjct 46101 TGGTTGTGTGCGTAGATAATACACACCTGTTTTGAGTCCCTTTTTCCATCCATAAAAGTG 46160 Query 202428 CATATTTGTTAATGATTTTGCA-GTTGGATCTTCCATCCAAAGATTTAAACTTTGCGATT 202486 |||| |||| | | | || | ||||| | |||||| ||| ||| | ||||| | Sbjct 46161 CATACTTGTCAGT-TTGCTGAATGTTGGTTGTTCCATGTAAATATTGAGGGACTGCGACT 46219 Query 202487 GACAAATATAAGCTCCTCTATCTCTAGACATATCTATAAGATTTTTCATTGGT--ATCTC 202544 || ||| | ||||||||| || ||||||||| |||| | ||| | || || Sbjct 46220 GATCTATAAAGATTCCTCTATCCGCAGCCATATCTAT--GATTGTCTTTTGCTTAATTTC 46277 Query 202545 CCAAACAATTTTATATTTTTCTTTTAGTCGTTTTGGTATAGTGTCGATATATTGAATACT 202604 |||||| |||| || ||| |||| || ||| || || |||| | | | Sbjct 46278 CCAAACTGTTTTGTACAATTCCTTTATGTGTGGTGGGATTTCTTCAATATGTCTCAAAGA 46337 Query 202605 ACCTTTATTCTGAATTATATTGTTTTTAATTGAATCATCCCAAATACCTAAATTAATAAG 202664 || || | ||| | || | || || | || | ||| | || | || | | Sbjct 46338 GCCGTTGTATGCAATAAGCTTTTGCTTCATAGTCTCGTTCCAGAGTCCAAGATCGACCAA 46397 Query 202665 ATCATTAATTAAATATTTATTAACAATAATAAACTCACCAGCT-AGTGTTCTTCTTGAAT 202723 ||||| | |||| | |||||||| || || ||||| ||| | | | ||| ||| Sbjct 46398 GTCATTGAGCAAATGTGGATTAACAACAAAGAATTCACC-GCTCAATACACGTCTGTAAT 46456 Query 202724 AAATATTACTTGTAAATGGTTCAAAACATTCATTATTACCTAAAATTTGACTGGTACTAG 202783 | || ||||| ||| |||| || ||| |||||||||| || ||||| ||| |||| | Sbjct 46457 AGATGTTACTAGTATATGGCTCGAAAGATTCATTATTTCCCAAAATCTGAGAGGTAGAGG 46516 Query 202784 CAGTTGGCATAGGTGC 202799 |||| |||||||| || Sbjct 46517 CAGTAGGCATAGGAGC 46532 Score = 109 bits (120), Expect = 2e-18 Identities = 304/458 (66%), Gaps = 14/458 (3%) Strand=Plus/Plus Query 206448 CTGGTCAATATATCGAGCTGTTTTATTAAA--TACGCCTAGCATAGGAATAATACCATTA 206505 ||| |||| ||| || ||| | ||||| ||||| | ||| |||| |||||||||| Sbjct 47472 CTGATCAACATACTTGGCGGTTGTGTTAAAGATACGC--AACATTGGAACAATACCATTA 47529 Query 206506 GAAGTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAA- 206564 || ||||||||| || | ||||| ||| || | | || || || || || || Sbjct 47530 GACTGTCCATTTGTACCCCGAATATATGAACCACTCGCACGTATTTTGTGAAT-TGCAAG 47588 Query 206565 TCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCC 206624 || ||||| || || |||| || ||||| | | | |||||| ||||||| Sbjct 47589 GCCTATTCCACCAGCTGATTTGCTGATGAAGGCACACTGCGTCAGTGTATTGAAAATTCC 47648 Query 206625 ATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGT 206684 ||| | |||| || |||| | | |||||||| ||| | |||||| || || Sbjct 47649 TGCAAGAGAATCATCTTGCATATCCAACAAAAAACAGGAAGACATTTGTGGGCGATTGGT 47708 Query 206685 TCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATA 206744 ||| |||||||||| || |||||||| ||||||||| | ||||| |||||| | || Sbjct 47709 TCCTGCATTAAATAGCGTTGGAGTAGCGTGTGTAAAAAACTTTTGGCTCATTAAGTGGTA 47768 Query 206745 AGTAGTTTTCACTTT---TTCTAAATCATTTTCGTGTAAACAAATTGCTACACGTAACCA 206801 |||| ||| | ||| | |||| ||| | | | ||||| | | Sbjct 47769 ---TGTTTCAACTGTACGTTCGACATCACCACAGTGGATTCCCGCGGAGACACGCATTAA 47825 Query 206802 CATATATTGAGGTCTTTCAATTAtttttttGTTAATGTGCATTAAATATGCACGCTCAAG 206861 ||| | |||||| | ||| | || || ||||| | ||| ||||| | || || | Sbjct 47826 CATGTGTTGAGGGCGTTCCACGATCTTGTTGTTGGTACGCAACAAATACGAGCGTTCCAA 47885 Query 206862 AGTTTTAAAGCCAAAATAATC-TATTAAATAATCACGT 206898 |||||||| ||||| ||||| || | || |||||||| Sbjct 47886 TGTTTTAAATCCAAAGTAATCGTACTGAA-AATCACGT 47922 >seq4 Length=637648 Score = 89.7 bits (98), Expect = 2e-12 Identities = 75/88 (85%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 423765 AGCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGGC-GAAAG-CCTC 423822 |||| ||||||||||||||| |||||||| ||||||||||| |||| || || || | Sbjct 608152 AGCACGGATGCCCGAGTGGT-TAAGGGGGGGGACTTAAGATCCTCTGGTTGAGAGACCGC 608094 Query 423823 GTGGGTTCAAACCCCACTCCGTGCATTT 423850 |||||||| |||||||||||||||| || Sbjct 608093 GTGGGTTCGAACCCCACTCCGTGCAATT 608066 >seq6 Length=842582 Score = 84.2 bits (92), Expect = 7e-11 Identities = 73/88 (83%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 423765 AGCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAG-CCTC 423822 |||| ||||| ||||| |||| |||| | |||||| ||| |||| ||| ||| || |||| Sbjct 6729 AGCACGGATGGCCGAGCGGTCAAAGGCGCCAGACTCAAGTTCTGGTGGGCGAGAGTCCTC 6670 Query 423823 GTGGGTTCAAACCCCACTCCGTGCATTT 423850 ||||||||||| |||||| |||||| || Sbjct 6669 GTGGGTTCAAATCCCACTTCGTGCAATT 6642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254225272227