Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12]
9 sequences; 9,791,141 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 6e-19
>seq5
Length=831028
Score = 109 bits (120), Expect = 6e-19
Identities = 244/364 (67%), Gaps = 2/364 (1%)
Strand=Plus/Minus
Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301
||| || ||| |||||||||||||||||| ||||| ||||| || ||||| || || ||
Sbjct 47775 TGAAACATACCACTTAATGAGCCAAAAGTTTTTTACACACGCTACTCCAACGCTATTTAA 47716
Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361
|| || || |||| ||| || ||||| ||| || || ||| ||| | ||||| ||
Sbjct 47715 TGCAGGAACCAATCGCCCACAAATGTCTTCCTGTTTTTTGTTGGATATGCAAGATGATTC 47656
Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421
| | || || | | | || || | | |||||||| |||| ||| | | |||||
Sbjct 47655 TCTTGCAGGAATTTTCAATACACTGACGCAGTGTGCCTTCATCAGCAAATCAGCTGGTGG 47596
Query 53422 TATCGG-TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480
|| || | || | | | || | ||||||| || || || ||| || || |
Sbjct 47595 AATAGGCCTTGCAATTCAC-AAAATACGTGCGAGTGGTTCATATATTCGGGGTACAAATG 47537
Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540
| | |||| || || || ||| | || |||| |||| || ||| ||| ||
Sbjct 47536 GACAGTCTAATGGTATTGTTCCAATGTTGCGTATCTTTAACACAACCGCCAAGTATGTTG 47477
Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600
| ||||| ||||| || | | ||| ||||| ||||| || | ||||| ||||| || |
Sbjct 47476 ATCAGGGGGGTGGTAAAAGAAGGGGTTCGTTTGCCATATATTTGGAGCCATGGCATGCGG 47417
Query 53601 ACAT 53604
| ||
Sbjct 47416 ATAT 47413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215938438200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |