Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20equi_20[genbank_20GCA_5F002189625.1_202017-06-12] 9 sequences; 9,791,141 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 4e-13 >seq2 Length=1844256 Score = 89.7 bits (98), Expect = 4e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 4959 CTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT 5018 || || |||||||| ||||| |||| |||||||| | |||| ||||| | | ||| Sbjct 638681 CTTGCGGCAAAAAAAGCCAAGACATTGGATATAAAATGACGTTCATCAGGAGTCAATTTA 638740 Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078 |||||||| | ||||| | ||||| | ||||||| | ||||| || || |||| | Sbjct 638741 TTCCAGTGTGCTAAATCCAAGCTGAAATCTATTTCTTCAGCGGTCCAGAAGGAGGCTTGC 638800 Query 5079 GCTTTTTTGTAC 5090 |||||||||||| Sbjct 638801 GCTTTTTTGTAC 638812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049553157997