Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30]
9 sequences; 8,347,606 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 2e-14
>seq1
Length=2540030
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||||||||| | || || ||||||| ||||||||||| | ||| |||| | |
Sbjct 2214455 ATGCAAATATTCGTCAAAACTTTAACAGGAAAAACTATAACCCTCGAGGTTGAGCCTAGC 2214396
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || ||| | || || ||||||||||| ||||| || || || || |||
Sbjct 2214395 GACACGATAGAGAATGTTAAGGCTAAGATTCAAGATAAGGAAGGCATCCCTCCAGACCAA 2214336
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | || ||||| || || || ||||||||| || | || || || || ||
Sbjct 2214335 CAGAGGTTGATATTTGCTGGTAAGCAGTTAGAGGATGGTAGGACTTTGAGTGACTACAAC 2214276
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| ||| || | ||||| || | | || || ||||| ||
Sbjct 2214275 ATCCAAAAGGAAAGTACCCTTCATTTAGTACTGAGGTTGCGTGGTGGAAT 2214226
Score = 84.2 bits (92), Expect = 3e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| ||||| | || || ||||||| ||||||||||| | ||| |||| | |
Sbjct 1523790 ATGCAGATATTCGTCAAAACTTTAACAGGAAAAACTATAACCCTCGAGGTTGAGCCTAGC 1523731
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || ||| | || || ||||| ||||| ||||| || || || || |||
Sbjct 1523730 GACACGATAGAGAATGTTAAGGCTAAGATTCAGGATAAGGAAGGAATTCCTCCAGACCAA 1523671
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | || ||||| || || || |||||||| || ||||| | || || |||
Sbjct 1523670 CAGAGGTTGATATTTGCTGGTAAGCAGCTAGAGGATGGTAGAACACTCAGTGACTACAAT 1523611
Query 124719 ATTCAAAAAGA 124729
|| || || ||
Sbjct 1523610 ATCCAGAAGGA 1523600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455915011200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |