Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 188 2e-42 >seq1 Length=2540030 Score = 188 bits (208), Expect = 2e-42 Identities = 182/234 (78%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || ||||| |||| ||||| || || ||||| ||||| |||||| Sbjct 1523561 ATACCTCCTCTGAGTCTAAGCACTAAATGTAGGGTGCTCTCCTTCTGGATATTGTAGTCA 1523620 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| || || |||||||| || | ||||||||| || ||| Sbjct 1523621 CTGAGTGTTCTACCATCCTCTAGCTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGA 1523680 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| |||||||||||||| || || ||||| |||| || |||||||| || Sbjct 1523681 GGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCA 1523740 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 ||||| || || ||||| || || || | ||||| || ||||||||||| ||| Sbjct 1523741 ACCTCGAGGGTTATAGTTTTTCCTGTTAAAGTTTTGACGAATATCTGCATATTG 1523794 Score = 167 bits (184), Expect = 5e-36 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 ||| ||||| || || |||||| | ||| ||||| || |||| || || |||||||| Sbjct 1523371 TTCCTTCTGGATGTTGTAGTCACTCAAAGTCCTACCATCCTCTAACTGCTTACCAGCAAA 1523430 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 || | ||||||||| || ||||| |||||||| |||||||||||||| || || ||||| Sbjct 1523431 TATCAACCTCTGTTGGTCTGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATT 1523490 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 |||| || |||||||| || ||||| || || |||||||| ||||| || ||||| || Sbjct 1523491 CTCTATCGTGTCGCTAGGCTCAACCTCGAGGGTTATAGTCTTGCCAGTGAGGGTTTTAAC 1523550 Query 104548 AAATATCTGCAT 104559 ||| || ||||| Sbjct 1523551 AAAAATTTGCAT 1523562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398267229372