Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=2540030 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||||||||||| ||| |||||| || || ||||| || || | || | ||| Sbjct 1523579 AGCACTAAATGTAGGGTGCTCTCCTTCTGGATATTGTAGTCACTGAGTGTTCTACCATCC 1523638 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 ||||||||||| || || | || || | ||| ||||| ||||| |||||||| || || Sbjct 1523639 TCTAGCTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGAGGAATTCCTTCCTTATCC 1523698 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 || || ||| | | ||| | || ||| | | ||| | |||| ||| | ||| Sbjct 1523699 TGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCAACCTCGAGGGTTATAGTT 1523758 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || |||| |||||| ||||| |||||||| Sbjct 1523759 TTTCCTGTTAAAGTTTTGACGAATATCTGCAT 1523790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012746898560