Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=2540030 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||||||||||| ||| | || || || || || ||||| || || || | | Sbjct 1523575 TCTAAGCACTAAATGTAGGGTGCTCTCCTTCTGGATATTGTAGTCACTGAGTGTTCTACC 1523634 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 || || |||||||| || ||| | || | || ||| ||||| |||||||||||||| || Sbjct 1523635 ATCCTCTAGCTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGAGGAATTCCTTCCTT 1523694 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||| ||| ||| | || || | | || || || | |||| Sbjct 1523695 ATCCTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCAACCTCGAGGGTTAT 1523754 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || || || |||||||| ||||| || ||||| || Sbjct 1523755 AGTTTTTCCTGTTAAAGTTTTGACGAATATCTGCATATT 1523793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644743789960