Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 >seq3 Length=1317241 Score = 111 bits (122), Expect = 2e-19 Identities = 354/540 (66%), Gaps = 12/540 (2%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || || ||||| |||| |||||||| ||| | || || ||||| || || ||||| Sbjct 1116621 GCAACGCCGACTTTGTTTAACGCGGGAACCAGGCACCCTCAAATGTCCTCTTGCTTCCTA 1116562 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | ||| |||| | || ||| | | || ||||| ||| | | | | | ||||| Sbjct 1116561 CTTGACATGCAAGAC-GATTCCCTGGCTGGGATTTTTAACACCTTGA--GCCAGTGCGCT 1116505 Query 94011 CATCTCA--AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGT 94068 | | | |||| || || |||||||| | | ||| | | | ||||| || Sbjct 1116504 TTTATAAGTAAATCAGCCGGTGGAATCGGACTTGCAATTCACAAAATCAGAGCCAGCGGA 1116445 Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || ||||| | || ||||| |||| |||||||| |||| || ||||| | | || Sbjct 1116444 TCATACATTAGGGGCACCAACGGCATTTCCAACGGGATCGTGCCCATGCTGAAGATATTT 1116385 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 ||| |||| ||||||||||| |||||||| | | || || || || ||| | Sbjct 1116384 AACGCGACGGCCAAGTACGTGGACCAAGGTGGTGGAAAACGTAAAGGCTCATTTGCGATA 1116325 Query 94189 TATCTCGAGCCCTGGCACGCGG--ACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 ||||| ||||| ||||| |||| | | || | || | || || | || ||||||| Sbjct 1116324 TATCTGGAGCCTTGGCATGCGGATATTTTCAAG--TTGTTAGATCTCAGGAAAAACCACG 1116267 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 || || || | || || || | |||||||| || ||| | |||||||| || | Sbjct 1116266 GCGCAGAAGACCAGCGTGCAAGGGATTTATTCTACGCGCTGTGGATCCCAGACCTGTTCA 1116207 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 ||||||| || ||| ||| |||| || | ||||| |||| ||| || | Sbjct 1116206 TGAAACGAGTTGAGGCAAATAAGAATTGGACACTGATGTGTCCAGATGAGTGTAGAGGTC 1116147 Query 94367 TGTCCGACGTTTGTGGA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGC 94425 || ||| ||||| ||| || | |||||| |||||| ||| || || ||||||| Sbjct 1116146 TGCACGAGGTTTGGGGAGACGAG-TTTGAACGTTTGTATACTCAGTATGAGCAGCAGGGC 1116088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723144343640