Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 152 1e-31 >seq3 Length=1317241 Score = 152 bits (168), Expect = 1e-31 Identities = 496/757 (66%), Gaps = 19/757 (3%) Strand=Plus/Plus Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 |||||||| || |||||||||||||| || | || | ||| || |||||||| ||| Sbjct 1115888 TTACACACTGCAACCTCGTCCTTGTTTGTGAATTGGACGATTTCACAGCAGAGGTTACTG 1115947 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTT-GCGATTGGCAGCGTCCTTGTAGAG 221838 | || || || |||| | | || ||| ||| ||| || ||||||||||| | Sbjct 1115948 GATTTAATAGTGCCCAAATTCTGCTGGTTACTCTTAGCG-TTACATGCGTCCTTGTATAA 1116006 Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGC 221898 ||| | ||| ||||||||| | || | | ||||| ||| | | ||||| Sbjct 1116007 CATGTACGGAGTGCCAGTCTCGATTTGGGACTGGAGAATTGCAAACCACAACT-TCTGG- 1116064 Query 221899 GCTC--ACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCA 221956 ||| | ||| | | | | | || | || |||||| ||||| | ||| Sbjct 1116065 GCTGGGATTGTCTT-TCGTCCCAAGCCCTG--CTGCTCATACTGAGTATACAAACGTTCA 1116121 Query 221957 AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAG 222016 |||| || || | |||||| ||| ||| |||| | ||||||||||| |||| Sbjct 1116122 AACTCGTCTCCCCAAACCTCGTGCAGACCTCTACACTCATCTGGACACATCAGTGTCCAA 1116181 Query 222017 TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGA 222076 | ||| || | | || | | |||||| ||||| |||||||||||||| | || | | Sbjct 1116182 TTCTTATTTGCCTCAACTCGTTTCATGAACAGGTCTGGGATCCACAGCGCGTAGAATAAA 1116241 Query 222077 TCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATG 222136 || || | ||||| || || |||||| ||||||||| ||||| || |||| ||||| Sbjct 1116242 TCCCTTGCACGCTGGTCTTCTGCGCCGTGGTTTTTCCTGAGATCTAACAACTTGAAAATA 1116301 Query 222137 TCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGA 222196 || || ||||| ||||||||||| | || | | ||| || || ||||| || Sbjct 1116302 TCCGCATGCCAAGGCTCCAGATATATCGCAAATGAGCCTTTACGTTTTCCACCACCTTGG 1116361 Query 222197 TCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 ||||| | | || ||||| || || || | || || | |||||||| Sbjct 1116362 TCCACGTACTTGGCCGTCGCGTTAAATATCTTCAGCATGGGCACGATCCCGTTGGAAATG 1116421 Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA---GGTTACTGGCAGACATGCCG 222313 |||||||||||| ||||||| | |||| ||| || | || | | ||| | ||| Sbjct 1116422 CCGTTGGTGCCCCTAATGTATGATCCGCTGGCTCTGATTTTGTGAATTGCA---AGTCCG 1116478 Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCT--CTTGAGAGTGTCCATGATGCCCT 222371 || |||||||| ||| || | ||||| || || || |||| | || || Sbjct 1116479 ATTCCACCGGCTGATTTACTTATAAAAGCGCA-CTGGCTCAAG-GTGTTAAAAATCCCAG 1116536 Query 222372 CCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAAC 222431 ||| || || || | | || || || || ||||| ||||| |||| | ||| | Sbjct 1116537 CCAGGGAATCGTCTTGCATGTCAAGTAGGAAGCAAGAGGACATTTGAGGGTGCCTGGTTC 1116596 Query 222432 AGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 |||||||||| || || | |||||||| ||||| Sbjct 1116597 CCGCGTTAAACAAAGTCGGCGTTGCGTGTGTGAAGTA 1116633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844695504960